RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SARAFQ96BY9 339 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 C1orf147Q96MC9 270 aaPredicted RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 ACTR3CQ9C0K3 210 aaPredicted RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 OR2J1Q9GZK6 312 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 TUBD1Q9UJT1 453 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 IGKV1-12A0A0C4DH73 117 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 IGKV1D-12P01611 117 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 SP1P08047 785 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 CRYGSP22914 178 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 HES3Q5TGS1 186 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 SELENOHQ8IZQ5 122 aaKnown RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 CPEB3Q8NE35 698 aaKnown RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 MRGPRDQ8TDS7 321 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 RAB39BQ96DA2 213 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 MARS2Q96GW9 593 aaKnown RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 TMEM9BQ9NQ34 198 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 PRSS50Q9UI38 385 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 IGHV3-43A0A0B4J1X8 118 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 A0A1B0GU03 582 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 DUXBA0A1W2PPF3 345 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 PPP5D1E7EU14 171 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 PGLYRP1O75594 196 aaPredicted RBP7.46□□□□□ -1.21
LIG4-204ENST00000611712 MT-CO2P00403 227 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 OR8U8P0C7N1 319 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 IGHV3-43DP0DP04 118 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 DLK1P80370 383 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 SMIM21Q3B7S5 101 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 ALKBH6Q3KRA9 238 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 NCMAPQ5T1S8 102 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 NCR3LG1Q68D85 454 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 KCNIP4Q6PIL6 250 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 ETV3LQ6ZN32 361 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 ZNF610Q8N9Z0 462 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 OR1K1Q8NGR3 316 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 CIB3Q96Q77 187 aaPredicted RBP7.46□□□□□ -1.21
LIG4-204ENST00000611712 RARRES2Q99969 163 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 TOLLIPQ9H0E2 274 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 ZNF552Q9H707 407 aaPredicted RBP7.46□□□□□ -1.21
LIG4-204ENST00000611712 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.46□□□□□ -1.21
LIG4-204ENST00000611712 GFOD1Q9NXC2 390 aa7.46□□□□□ -1.21
LIG4-204ENST00000611712 ZNF716A6NP11 495 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 ETV2O00321 342 aaPredicted RBP7.46□□□□□ -1.22
LIG4-204ENST00000611712 SPINK9Q5DT21 86 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 DEFB108BQ8NET1 73 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 SIGLEC12Q96PQ1 595 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 ZNF581Q9P0T4 197 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 KIAA1456Q9P272 454 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 PSG11Q9UQ72 335 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 IGKV1-27A0A075B6S5 117 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 H0Y980 276 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 CLDN34H7C241 214 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 AP4M1O00189 453 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 EIF2S3P41091 472 aaKnown RBP7.46□□□□□ -1.22
LIG4-204ENST00000611712 ESPL1Q14674 2120 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 ZNF528Q3MIS6 628 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 CYB561D1Q8N8Q1 229 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 BOD1Q96IK1 185 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 DEPPQ9NTK1 212 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 LYRM2Q9NU23 88 aaPredicted RBP7.46□□□□□ -1.22
LIG4-204ENST00000611712 GAR1Q9NY12 217 aaKnown RBP7.46□□□□□ -1.22
LIG4-204ENST00000611712 DLL3Q9NYJ7 618 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 IL36RNQ9UBH0 155 aa7.46□□□□□ -1.22
LIG4-204ENST00000611712 MBP02144 154 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 TNFSF4P23510 183 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 DEFA6Q01524 100 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 TGIF1Q15583 401 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 Q3ZCU0 254 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 NSUN5P2Q63ZY6 315 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 SLC25A40Q8TBP6 338 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 RSG1Q9BU20 258 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 COLQQ9Y215 455 aaPredicted RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 PCDH15Q96QU1 1955 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 IGSF23A1L1A6 192 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 PMS2P1A4D2B8 440 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 ZFP36L1Q07352 338 aaKnown RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 BTNL8Q6UX41 500 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 BTNL3Q6UXE8 466 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 NUFIP2Q7Z417 695 aaKnown RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 EDARADDQ8WWZ3 215 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 GPR146Q96CH1 333 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 C1QTNF5Q9BXJ0 243 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 IL36GQ9NZH8 169 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 SH3BGRL2Q9UJC5 107 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 PROCRQ9UNN8 238 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 LAMP3Q9UQV4 416 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 TSTD3H0UI37 97 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 HAND1O96004 215 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 KITLGP21583 273 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 SOX8P57073 446 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 RAB4BP61018 213 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 LINC00596Q86U02 117 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 OR2Z1Q8NG97 314 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 SSX3Q99909 188 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 GINS3Q9BRX5 216 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 REPIN1Q9BWE0 567 aaKnown RBP7.45□□□□□ -1.22
LIG4-204ENST00000611712 IL17BQ9UHF5 180 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 ZNF407Q9C0G0 2248 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 MYO7BQ6PIF6 2116 aa7.45□□□□□ -1.22
LIG4-204ENST00000611712 CACNA1GO43497 2377 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms