RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 OR13D1Q8NGV5 346 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 MAFAQ8NHW3 353 aaPredicted RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 EDARADDQ8WWZ3 215 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 ABI3Q9P2A4 366 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 A0A087X0M5 115 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 A0A1B0GX30 115 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 MAP1LC3B2A6NCE7 125 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 H0Y8G0 127 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 CDIPTO14735 213 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 CIDEAO60543 219 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 CBR3O75828 277 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 LYZL6O75951 148 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 PDGFBP01127 241 aaPredicted RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 FOXG1P55316 489 aaPredicted RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 FAM3BP58499 235 aaPredicted RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 PMS2P11Q13670 270 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 TMEM41BQ5BJD5 291 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 SPNS3Q6ZMD2 512 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 EIF4E3Q8N5X7 224 aaKnown RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 IL22RA2Q969J5 263 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 SPSB1Q96BD6 273 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 GGACTQ9BVM4 153 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 PHF7Q9BWX1 381 aaPredicted RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 MAP1LC3BQ9GZQ8 125 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 UBE2ZQ9H832 354 aaPredicted RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 B4GALT7Q9UBV7 327 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 STARD10Q9Y365 291 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 STRAPQ9Y3F4 350 aaKnown RBP8.28□□□□□ -1.08
TPM1-233ENST00000610733 TMED3Q9Y3Q3 217 aa8.28□□□□□ -1.08
TPM1-233ENST00000610733 ZNF320A2RRD8 509 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 NUDT19A8MXV4 375 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 F8VVB4 439 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 F8VWA3 439 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 HBE1P02100 147 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 RPL29P47914 159 aaKnown RBP8.27□□□□□ -1.09
TPM1-233ENST00000610733 DSCR4P56555 118 aaPredicted RBP8.27□□□□□ -1.09
TPM1-233ENST00000610733 MST1LQ2TV78 715 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 PTX4Q96A99 478 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 WBP1Q96G27 269 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 RIMS4Q9H426 269 aaPredicted RBP8.27□□□□□ -1.09
TPM1-233ENST00000610733 OR1A1Q9P1Q5 309 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 CLN8Q9UBY8 286 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 LDLRAD4O15165 306 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 HLA-DRB3P79483 266 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 ENDOGQ14249 297 aaKnown RBP8.27□□□□□ -1.09
TPM1-233ENST00000610733 RAB35Q15286 201 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 TGIF2LXQ8IUE1 241 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 LFNGQ8NES3 379 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 CLDN23Q96B33 292 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 LIME1Q9H400 295 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 FUT9Q9Y231 359 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 TRAV34A0A0B4J273 112 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 KIR2DS1A0A191URI9 304 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 XKRY2A2RUG3 117 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 CELA3AP09093 270 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 G6PCP35575 357 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 KIR2DS4P43632 304 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 PSMB3P49720 205 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 SUMO3P55854 103 aaPredicted RBP8.27□□□□□ -1.09
TPM1-233ENST00000610733 KIR2DS1Q14954 304 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 PRR31Q5SQ13 230 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 CDPF1Q6NVV7 123 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 OR2V1Q8NHB1 315 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 GNPNAT1Q96EK6 184 aaPredicted RBP8.27□□□□□ -1.09
TPM1-233ENST00000610733 Q96M66 194 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 PACRGQ96M98 296 aaPredicted RBP8.27□□□□□ -1.09
TPM1-233ENST00000610733 CFHR5Q9BXR6 569 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 WDFY3Q8IZQ1 3526 aa8.27□□□□□ -1.09
TPM1-233ENST00000610733 IGKV1D-13A0A0B4J2D9 117 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 KIAA1324LA8MWY0 1029 aaPredicted RBP8.26□□□□□ -1.09
TPM1-233ENST00000610733 IGKV1-13P0DP09 117 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 PRB4P10163 310 aaPredicted RBP8.26□□□□□ -1.09
TPM1-233ENST00000610733 RPS23P62266 143 aaKnown RBP8.26□□□□□ -1.09
TPM1-233ENST00000610733 ZNF826PQ6ZT77 177 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 MRGPRDQ8TDS7 321 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 PINX1Q96BK5 328 aaKnown RBP8.26□□□□□ -1.09
TPM1-233ENST00000610733 HS3ST6Q96QI5 342 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 NEU1Q99519 415 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 ATG101Q9BSB4 218 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 CARHSP1Q9Y2V2 147 aaKnown RBP8.26□□□□□ -1.09
TPM1-233ENST00000610733 IGKV1-12A0A0C4DH73 117 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 OR6C6A6NF89 314 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 MARCH11A6NNE9 402 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 IGKV1D-12P01611 117 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 FGF7P21781 194 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 TMEM187Q14656 261 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 IGKV1-27A0A075B6S5 117 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 FGF16O43320 207 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 ZNF737O75373 536 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 DANCRP0C864 163 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 ZNF17P17021 662 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 MAGEA5P43359 124 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 OR3A1P47881 315 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 ETFRF1Q6IPR1 90 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 MRPL13Q9BYD1 178 aaKnown RBP8.26□□□□□ -1.09
TPM1-233ENST00000610733 OR2H1Q9GZK4 316 aa8.26□□□□□ -1.09
TPM1-233ENST00000610733 COL4A4P53420 1690 aaPredicted RBP8.25□□□□□ -1.09
TPM1-233ENST00000610733 THADAQ6YHU6 1953 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms