RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 CXXC4Q9H2H0 198 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 OR51I2Q9H344 312 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 RIMS4Q9H426 269 aaPredicted RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 PLK3Q9H4B4 646 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 RHOFQ9HBH0 211 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 TAF9BQ9HBM6 251 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 MSL2Q9HCI7 577 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 GSKIPQ9P0R6 139 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 TAAR3PQ9P1P4 343 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 TMED3Q9Y3Q3 217 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 RNF115Q9Y4L5 304 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 H0YL77 283 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 TSPAN4O14817 238 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 MLNRO43193 412 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 CTXN2P0C2S0 81 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 H2AFB1P0C5Y9 115 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 OR4A8P0C604 315 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 RND3P61587 244 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 IL13RA2Q14627 380 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 ADIPOQQ15848 244 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 FAM122CQ6P4D5 195 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 HAGHLQ6PII5 290 aaPredicted RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 LIAT1Q6ZQX7 453 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 DMRTC2Q8IXT2 367 aaPredicted RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 COMMD1Q8N668 190 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 LYPD6BQ8NI32 183 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 C18orf12Q96KH6 178 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 PKIBQ9C010 78 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 SLC2A9Q9NRM0 540 aa9.88□□□□□ -0.83
VRK3-223ENST00000601341 RCC2Q9P258 522 aaKnown RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 FBXO9Q9UK97 447 aaPredicted RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 SPTBN1Q01082 2364 aaKnown RBP9.88□□□□□ -0.83
VRK3-223ENST00000601341 DUXBA0A1W2PPF3 345 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 ZNF705EA8MWA4 302 aaPredicted RBP9.87□□□□□ -0.83
VRK3-223ENST00000601341 DEFB108AA8MXU0 73 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 DNASE2O00115 360 aaPredicted RBP9.87□□□□□ -0.83
VRK3-223ENST00000601341 CDS2O95674 445 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 CTRB1P17538 263 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 ATF4P18848 351 aaPredicted RBP9.87□□□□□ -0.83
VRK3-223ENST00000601341 DUSP1P28562 367 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 CAV2P51636 162 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 S100A10P60903 97 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 FGF12P61328 243 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 IL24Q13007 206 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 PIGYQ3MUY2 71 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 SMUG1Q53HV7 270 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 CTRB2Q6GPI1 263 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 CLRN3Q8NCR9 226 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 MSI2Q96DH6 328 aaKnown RBP9.87□□□□□ -0.83
VRK3-223ENST00000601341 TSNAXQ99598 290 aaKnown RBP9.87□□□□□ -0.83
VRK3-223ENST00000601341 LIME1Q9H400 295 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 SPACA1Q9HBV2 294 aa9.87□□□□□ -0.83
VRK3-223ENST00000601341 KIR2DS1A0A191URI9 304 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 TRAPPC2LH3BP13 241 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 J3QT63 122 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 TOR1AO14656 332 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 SIAH2O43255 324 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 SEC11BP0C7V7 166 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 APOBEC3AP31941 199 aaPredicted RBP9.86□□□□□ -0.83
VRK3-223ENST00000601341 FCGR2CP31995 323 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 KIR2DS4P43632 304 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 P2RY1P47900 373 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 RAB5CP51148 216 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 F2RL1P55085 397 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 HERV-K104P61576 105 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 DEFA5Q01523 94 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 ZNF154Q13106 437 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 KIR2DS1Q14954 304 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 WDR86Q86TI4 376 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 LDLRAD3Q86YD5 345 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 OR2Z1Q8NG97 314 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 FAM222BQ8WU58 562 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 NARS2Q96I59 477 aaKnown RBP9.86□□□□□ -0.83
VRK3-223ENST00000601341 AIFM2Q9BRQ8 373 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 POLDIP2Q9Y2S7 368 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 PLCE1Q9P212 2302 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 TRBV6-6A0A0A6YYG2 114 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 E7EQL1 145 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 SNAPINO95295 136 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 NAPSAO96009 420 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 GRPP07492 148 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 OR5AC1P0C628 307 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 MST1LQ2TV78 715 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 SCCPDHQ8NBX0 429 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 GLYATL2Q8WU03 294 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 SLAMF9Q96A28 289 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 TMEM204Q9BSN7 226 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 MS4A7Q9GZW8 240 aaPredicted RBP9.86□□□□□ -0.83
VRK3-223ENST00000601341 FAM212BQ9NTI7 297 aaPredicted RBP9.86□□□□□ -0.83
VRK3-223ENST00000601341 CISD1Q9NZ45 108 aaKnown RBP9.86□□□□□ -0.83
VRK3-223ENST00000601341 PRR13Q9NZ81 148 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 MTCH1Q9NZJ7 389 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 ZDHHC8Q9ULC8 765 aa9.86□□□□□ -0.83
VRK3-223ENST00000601341 MYO18BQ8IUG5 2567 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 BORCS7-ASMTA0A0B4J1R7 106 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 CDIPTO14735 213 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 ST8SIA3O43173 380 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 KCNAB3O43448 404 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms