RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 GNPNAT1Q96EK6 184 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-225ENST00000600733 ATP5SQ99766 215 aa17.2■□□□□ 0.34
SHKBP1-225ENST00000600733 DDA1Q9BW61 102 aa17.2■□□□□ 0.34
SHKBP1-225ENST00000600733 KIAA1456Q9P272 454 aa17.2■□□□□ 0.34
SHKBP1-225ENST00000600733 NCOR1O75376 2440 aa17.2■□□□□ 0.34
SHKBP1-225ENST00000600733 SERPINE2P07093 398 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 APLNRP35414 380 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 TMEM267Q0VDI3 215 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 FABP9Q0Z7S8 132 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 Q6ZRM9 215 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 P4HA3Q7Z4N8 544 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 LINC00596Q86U02 117 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 MCEMP1Q8IX19 187 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 SMDT1Q9H4I9 107 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 MPC1Q9Y5U8 109 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 TRBV6-6A0A0A6YYG2 114 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 IL18BPO95998 194 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 CTAG1AP78358 180 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 IL24Q13007 206 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 CLN3Q13286 438 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 AKR1C8PQ5T2L2 129 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 SP5Q6BEB4 398 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 ZNF880Q6PDB4 577 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 SLC16A13Q7RTY0 426 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 OR8G5Q8NG78 346 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 UBALD1Q8TB05 177 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 ABI3Q9P2A4 366 aa17.19■□□□□ 0.34
SHKBP1-225ENST00000600733 OR5B21A6NL26 309 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 H3BQ15 152 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 OR2C1O95371 312 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 SRP19P09132 144 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 OPA3Q9H6K4 179 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 IFT22Q9H7X7 185 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 BTBD17A6NE02 478 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 KIAA1324LA8MWY0 1029 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 H0YL77 283 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 S100GP29377 79 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 ICAM4Q14773 271 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 RNASE11Q8TAA1 199 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 SNIP1Q8TAD8 396 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 OR51I2Q9H344 312 aa17.18■□□□□ 0.34
SHKBP1-225ENST00000600733 TECTAO75443 2155 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 ZNF727A8MUV8 499 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 DEGS1O15121 323 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 ATXN7O15265 892 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 MT-CO3P00414 261 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 IGKV1-39P01597 117 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 IGLV2-14P01704 120 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 IGKV1D-39P04432 117 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 RNPS1Q15287 305 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 STX12Q86Y82 276 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 CYB561D1Q8N8Q1 229 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 OR10V1Q8NGI7 309 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 NANPQ8TBE9 248 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 CABLES2Q9BTV7 478 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 CEACAM1P13688 526 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 MEOX1P50221 254 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 TAS2R30P59541 319 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 DBX2Q6ZNG2 339 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 MDP1Q86V88 176 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 THNSL2Q86YJ6 484 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 RAB39BQ96DA2 213 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 YPEL4Q96NS1 127 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 ARRDC1-AS1Q9H2J1 176 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 PPP1R3CQ9UQK1 317 aa17.17■□□□□ 0.34
SHKBP1-225ENST00000600733 KIAA2026Q5HYC2 2103 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 IGHV3-64DA0A0J9YX35 117 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 A0A1B0GU03 582 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 SIRPB1O00241 398 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 TXNL1O43396 289 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 SCAF4O95104 1147 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 Q6P435 159 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 GUCD1Q96NT3 240 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 CACNG5Q9UF02 275 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 DIDO1Q9BTC0 2240 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 A0A1W2PR80 420 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 IGHV2-5P01817 119 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 NQO2P16083 231 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 TESK1Q15569 626 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 OR8G1Q15617 311 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 WDR86Q86TI4 376 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 MYPOPQ86VE0 399 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 OR1K1Q8NGR3 316 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 PKIBQ9C010 78 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 METTL1Q9UBP6 276 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 IL17BQ9UHF5 180 aa17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-225ENST00000600733 ZNF806P0C7X5 589 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 IAPPP10997 89 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 MPLP40238 635 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 RPL23AP62750 156 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 TLE4Q04727 773 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 SLC25A24Q6NUK1 477 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 CLDND2Q8NHS1 167 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 MALSU1Q96EH3 234 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 RSG1Q9BU20 258 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 GPR87Q9BY21 358 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 UNKLQ9H9P5 680 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 WSB1Q9Y6I7 421 aa17.15■□□□□ 0.34
SHKBP1-225ENST00000600733 J3QT63 122 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms