RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 ETV6P41212 452 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 SOX2P48431 317 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 RAB7AP51149 207 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 FABP5Q01469 135 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 MADCAM1Q13477 382 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 HES1Q14469 280 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 CCDC58Q4VC31 144 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 DMKNQ6E0U4 476 aaPredicted RBP9.12□□□□□ -0.95
HIF3A-217ENST00000600236 RPL22L1Q6P5R6 122 aaKnown RBP9.12□□□□□ -0.95
HIF3A-217ENST00000600236 RNF144BQ7Z419 303 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 OSR2Q8N2R0 312 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 OR51D1Q8NGF3 324 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 OR13A1Q8NGR1 328 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 GPR148Q8TDV2 347 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 RCC1LQ96I51 464 aaKnown RBP9.12□□□□□ -0.95
HIF3A-217ENST00000600236 METTL9Q9H1A3 318 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 AURKAIP1Q9NWT8 199 aaPredicted RBP9.12□□□□□ -0.95
HIF3A-217ENST00000600236 PEX16Q9Y5Y5 336 aa9.12□□□□□ -0.95
HIF3A-217ENST00000600236 TRAV24A0A0B4J272 114 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 PSMB11A5LHX3 300 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 E9PI62 339 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 ZNF780AO75290 641 aaPredicted RBP9.11□□□□□ -0.95
HIF3A-217ENST00000600236 SC5DO75845 299 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 HTR3BO95264 441 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 SNRNP70P08621 437 aaKnown RBP9.11□□□□□ -0.95
HIF3A-217ENST00000600236 IGLL1P15814 213 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 TMEM11P17152 192 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 PAX5Q02548 391 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 LTC4SQ16873 150 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 C22orf42Q6IC83 251 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 LINC00596Q86U02 117 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 OR8H3Q8N146 312 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 ZFP41Q8N8Y5 198 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 OR10X1Q8NGY0 326 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 OR56B4Q8NH76 319 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 MRGPRDQ8TDS7 321 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 DPF1Q92782 380 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 TMEM106AQ96A25 262 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 SLC25A46Q96AG3 418 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 PGLYRP3Q96LB9 341 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 GPR61Q9BZJ8 451 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 TAS2R4Q9NYW5 299 aa9.11□□□□□ -0.95
HIF3A-217ENST00000600236 SIRT4Q9Y6E7 314 aaPredicted RBP9.11□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A18PA6NE21 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A16PA6NEW6 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A20PA6NIJ5 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 SH2D7A6NKC9 451 aaPredicted RBP9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A9PA6NNJ1 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A12PA8MX19 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A5PA8MXJ8 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 NPIPB11E5RHQ5 1161 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FGF16O43320 207 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 OR7C1O76099 320 aaPredicted RBP9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A15PP0C7V4 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A13PP0C7W8 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A14PP0C7W9 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 FAM90A24PP0C7X0 464 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 CGB3P0DN86 165 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 CGB7P0DN87 165 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 CD40LGP29965 261 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 ZNF93P35789 620 aaPredicted RBP9.1□□□□□ -0.95
HIF3A-217ENST00000600236 RPS19P39019 145 aaKnown RBP9.1□□□□□ -0.95
HIF3A-217ENST00000600236 GNG10P50151 68 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 RORCP51449 518 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 SLC35B1P78383 322 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 PIGYQ3MUY2 71 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 DDI2Q5TDH0 399 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 RSBN1Q5VWQ0 802 aaPredicted RBP9.1□□□□□ -0.95
HIF3A-217ENST00000600236 ZNF529Q6P280 563 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 ASCL4Q6XD76 172 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 TMEM91Q6ZNR0 172 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 MS4A15Q8N5U1 240 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 SUMF2Q8NBJ7 301 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 Q8NFD4 153 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 OR51A2Q8NGJ7 313 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 CHPT1Q8WUD6 406 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 TMEM203Q969S6 136 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 SMIM19Q96E16 107 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 DPCDQ9BVM2 203 aaPredicted RBP9.1□□□□□ -0.95
HIF3A-217ENST00000600236 LINC00574Q9H8X3 128 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 RAB9BQ9NP90 201 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 TMEM138Q9NPI0 162 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 CKLFQ9UBR5 152 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 ING4Q9UNL4 249 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 PSG11Q9UQ72 335 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 ST3GAL6Q9Y274 331 aa9.1□□□□□ -0.95
HIF3A-217ENST00000600236 TMEM30CPA0ZSE6 113 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 SERPINE3A8MV23 424 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 CDRT1O95170 752 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 IGKV1D-33P01593 117 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 IGKV1-33P01594 117 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 IGHV3-7P01780 117 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 AMY1AP04745 511 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 AMY2AP04746 511 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 GZMHP20718 246 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 IL3RAP26951 378 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 BDKRB2P30411 391 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 SLC6A1P30531 599 aa9.09□□□□□ -0.95
HIF3A-217ENST00000600236 SSTR5P35346 364 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms