RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	MTFP1	Q9UDX5	166 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	AUP1	Q9Y679	476 aa		18.05	■□□□□ 0.48
LTBP4-227	ENST00000600026	FBN3	Q75N90	2809 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF729	A6NN14	1252 aa	Predicted RBP	18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	ORC5	O43913	435 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF273	Q14593	569 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026		Q6ZS49	121 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	C1orf229	Q6ZS94	237 aa	Predicted RBP	18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	GVQW1	Q8N7I0	195 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	BEST4	Q8NFU0	473 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	MAFIP	Q8WZ33	124 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF714	Q96N38	554 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	ONECUT1	Q9UBC0	465 aa		18.04	■□□□□ 0.48
LTBP4-227	ENST00000600026	TRDC	B7Z8K6	153 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	SPINT2	O43291	252 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	ARF6	P62330	175 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	HLA-DRB3	P79483	266 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	TRIQK	Q629K1	86 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	ARL11	Q969Q4	196 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	CCDC32	Q9BV29	185 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	SIRPD	Q9H106	197 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	TAF9B	Q9HBM6	251 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	CALY	Q9NYX4	217 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	KLK11	Q9UBX7	282 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	ANAPC10	Q9UM13	185 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	HIVEP2	P31629	2446 aa		18.03	■□□□□ 0.48
LTBP4-227	ENST00000600026	NIPBL	Q6KC79	2804 aa	eCLIP	18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	MEX3A	A1L020	520 aa	Known RBP	18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	GSTT2B	P0CG30	244 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	ZNF728	P0DKX0	622 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	MMP9	P14780	707 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	GDNF	P39905	211 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	INPP1	P49441	399 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	HMGN3	Q15651	99 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026		Q6ZPA2	131 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	TCF23	Q7RTU1	214 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	KIR3DL3	Q8N743	410 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	TAS2R8	Q9NYW2	309 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	RBMX2	Q9Y388	322 aa	Known RBP	18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	KPTN	Q9Y664	436 aa		18.02	■□□□□ 0.48
LTBP4-227	ENST00000600026	KBTBD11-OT1	A0A1B0GTJ5	212 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	hCG_1809904	A0A1W2PP81	198 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026		A0A1W2PPE2	198 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026		A0A1W2PR64	198 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026		A0A1W2PRV1	198 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	C12orf77	C9JDV5	145 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	FCER2	P06734	321 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	CSF1	P09603	554 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	CCL3L1	P16619	93 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	NAT1	P18440	290 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	HNF1A	P20823	631 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	ARPC4	P59998	168 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	CHRFAM7A	Q494W8	412 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	METTL11B	Q5VVY1	283 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	PRR18	Q8N4B5	295 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	TBX15	Q96SF7	602 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	SDHC	Q99643	169 aa	Predicted RBP	18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	PCGF1	Q9BSM1	259 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	ZNF107	Q9UII5	783 aa	Predicted RBP	18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026	ANXA10	Q9UJ72	324 aa		18.01	■□□□□ 0.47
LTBP4-227	ENST00000600026		J3QRK9	145 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	FABP7	O15540	132 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	TOX4	O94842	621 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	HBZ	P02008	142 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	CGB3	P0DN86	165 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	CGB7	P0DN87	165 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	AP3S2	P59780	193 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	OR4A4P	Q8NGN8	299 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	UPRT	Q96BW1	309 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	GALM	Q96C23	342 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	CDC42EP3	Q9UKI2	254 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	SVEP1	Q4LDE5	3571 aa		18	■□□□□ 0.47
LTBP4-227	ENST00000600026	SON	P18583	2426 aa	Known RBP	17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	ZNF736	B4DX44	427 aa	Predicted RBP	17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	C15orf65	H3BRN8	121 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026		M0R1W7	72 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	LANCL1	O43813	399 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	CTXN2	P0C2S0	81 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	GSTT2	P0CG29	244 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	SSTR5	P35346	364 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	OR3A3	P47888	321 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	TAS2R46	P59540	309 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	TAS2R19	P59542	299 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	BAK1	Q16611	211 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	C17orf58	Q2M2W7	97 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	ACTBL2	Q562R1	376 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	OR52W1	Q6IF63	320 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	VMO1	Q7Z5L0	202 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	TOMM5	Q8N4H5	51 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026		Q8N7P7	452 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	TMEM229B	Q8NBD8	167 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	OR10A7	Q8NGE5	316 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	RFESD	Q8TAC1	157 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	SNAPC3	Q92966	411 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	TRIM63	Q969Q1	353 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	IDI2-AS1	Q9NZ38	188 aa		17.99	■□□□□ 0.47
LTBP4-227	ENST00000600026	FN1	P02751	2386 aa	Known RBP	17.98	■□□□□ 0.47
LTBP4-227	ENST00000600026	NSD1	Q96L73	2696 aa	Predicted RBP	17.98	■□□□□ 0.47
LTBP4-227	ENST00000600026	IGKV1D-8	A0A087WSZ0	117 aa		17.98	■□□□□ 0.47
LTBP4-227	ENST00000600026	FSHB	P01225	129 aa		17.98	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms