RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 C22orf15Q8WYQ4 148 aa16.54■□□□□ 0.24
IRF3-221ENST00000598808 UPRTQ96BW1 309 aa16.54■□□□□ 0.24
IRF3-221ENST00000598808 TBX15Q96SF7 602 aa16.54■□□□□ 0.24
IRF3-221ENST00000598808 SIRPDQ9H106 197 aa16.54■□□□□ 0.24
IRF3-221ENST00000598808 ETAA1Q9NY74 926 aa16.54■□□□□ 0.24
IRF3-221ENST00000598808 IGHV4-38-2P0DP08 117 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 CBX5P45973 191 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 GLIPR1P48060 266 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 DLX1P56177 255 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 TATDN3Q17R31 274 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 CDNFQ49AH0 187 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 Q6ZTK2 550 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 GCDHQ92947 438 aaPredicted RBP16.53■□□□□ 0.24
IRF3-221ENST00000598808 RAB3CQ96E17 227 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 Q96M66 194 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 NUP50Q9UKX7 468 aa16.53■□□□□ 0.24
IRF3-221ENST00000598808 SVEP1Q4LDE5 3571 aa16.52■□□□□ 0.24
IRF3-221ENST00000598808 TRGV10A0A0A0MS01 117 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 hCG_1809904A0A1W2PP81 198 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 A0A1W2PPE2 198 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 A0A1W2PR64 198 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 A0A1W2PRV1 198 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 M0R1W7 72 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 PRAF2O60831 178 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 MT-ND4P03905 459 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 GLP1RP43220 463 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 VEGFCP49767 419 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 ZNF714Q96N38 554 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 MS4A7Q9GZW8 240 aaPredicted RBP16.52■□□□□ 0.23
IRF3-221ENST00000598808 SPACA1Q9HBV2 294 aa16.52■□□□□ 0.23
IRF3-221ENST00000598808 MEIKINA0A087WXM9 373 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 SERPINE3A8MV23 424 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 MCRIP1C9JLW8 97 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 MMP9P14780 707 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 HIST1H1DP16402 221 aaKnown RBP16.51■□□□□ 0.23
IRF3-221ENST00000598808 MEF2CQ06413 473 aaPredicted RBP16.51■□□□□ 0.23
IRF3-221ENST00000598808 KLRD1Q13241 179 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 MEF2DQ14814 521 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 MOGAT2Q3SYC2 334 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 KLF17Q5JT82 389 aaPredicted RBP16.51■□□□□ 0.23
IRF3-221ENST00000598808 RUSC1-AS1Q66K80 236 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 BRD3OSQ6XYD6 125 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 ZNF782Q6ZMW2 699 aaPredicted RBP16.51■□□□□ 0.23
IRF3-221ENST00000598808 COQ2Q96H96 371 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 METTL8Q9H825 291 aaKnown RBP16.51■□□□□ 0.23
IRF3-221ENST00000598808 NUDT15Q9NV35 164 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 KIF25Q9UIL4 384 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 CUBNO60494 3623 aa16.51■□□□□ 0.23
IRF3-221ENST00000598808 JMJD1CQ15652 2540 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 A0A1W2PRD5 423 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 A0A1W2PRF3 423 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 A0A1W2PRM7 423 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 ODAMA1E959 279 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 H3BUI4 141 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 CD74P04233 296 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 CSN2P05814 226 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 H2AFB2P0C5Z0 115 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 ZNF728P0DKX0 622 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 PTHLHP12272 177 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 ERP29P30040 261 aaKnown RBP16.5■□□□□ 0.23
IRF3-221ENST00000598808 RAB25P57735 213 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 Q8N7P7 452 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 PLPPR1Q8TBJ4 325 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 DMRTB1Q96MA1 342 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 NICN1Q9BSH3 213 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 IFT22Q9H7X7 185 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 LINC00312Q9Y6C7 94 aa16.5■□□□□ 0.23
IRF3-221ENST00000598808 C7orf66A4D0T2 115 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A10PA6NDY2 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A18PA6NE21 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A16PA6NEW6 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 TMEM235A6NFC5 223 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A20PA6NIJ5 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A8PA6NJQ4 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A7PA6NKC0 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A22PA8MWA6 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A12PA8MX19 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A5PA8MXJ8 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A23PA8MXZ1 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 IFNA2P01563 188 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A15PP0C7V4 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A13PP0C7W8 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A14PP0C7W9 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FAM90A24PP0C7X0 464 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 COX7A1P24310 79 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 FPR2P25090 351 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 KCNJ3P48549 501 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 GNG2P59768 71 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 RBM39Q14498 530 aaKnown RBP16.49■□□□□ 0.23
IRF3-221ENST00000598808 STEAP1BQ6NZ63 245 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 TCF23Q7RTU1 214 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 ANAPC10Q9UM13 185 aa16.49■□□□□ 0.23
IRF3-221ENST00000598808 TMEM30CPA0ZSE6 113 aa16.48■□□□□ 0.23
IRF3-221ENST00000598808 UBE2QL1A1L167 161 aa16.48■□□□□ 0.23
IRF3-221ENST00000598808 FOXI3A8MTJ6 420 aaPredicted RBP16.48■□□□□ 0.23
IRF3-221ENST00000598808 MFNGO00587 321 aa16.48■□□□□ 0.23
IRF3-221ENST00000598808 PDCD6O75340 191 aa16.48■□□□□ 0.23
IRF3-221ENST00000598808 NDUFB6O95139 128 aa16.48■□□□□ 0.23
IRF3-221ENST00000598808 FUT3P21217 361 aa16.48■□□□□ 0.23
IRF3-221ENST00000598808 MECP2P51608 486 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms