RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 OR1S1Q8NH92 325 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 PRR7Q8TB68 274 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 CITED4Q96RK1 184 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 GLS2Q9UI32 602 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 ERRFI1Q9UJM3 462 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 ICE1Q9Y2F5 2266 aa14.31□□□□□ -0.12
SHKBP1-216ENST00000598201 KANTRA0A1W2PQU2 76 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 LINC00862A6NCI5 91 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 NPIPB11E5RHQ5 1161 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 RLN2P04090 185 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 GNLYP22749 145 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 OR3A1P47881 315 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 COL10A1Q03692 680 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 AESQ08117 197 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 HMGN3Q15651 99 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 SMIM21Q3B7S5 101 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 MEX3BQ6ZN04 569 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 FOXRED2Q8IWF2 684 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 LGI3Q8N145 548 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 CD177Q8N6Q3 437 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 COQ2Q96H96 371 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 MEGF10Q96KG7 1140 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 TAF9BQ9HBM6 251 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 KIF25Q9UIL4 384 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 TRGV8A0A0C4DH27 118 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 DPRXA6NFQ7 191 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 UQCRFS1P47985 274 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 CASP6P55212 293 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 P2RX3P56373 397 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 TESK1Q15569 626 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 ST8SIA2Q92186 375 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 DMRTA2Q96SC8 542 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 PARP12Q9H0J9 701 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 TMEM222Q9H0R3 208 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 MEMO1Q9Y316 297 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 POLEQ07864 2286 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 KIAA2026Q5HYC2 2103 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 RELNP78509 3460 aa14.3□□□□□ -0.12
SHKBP1-216ENST00000598201 TMEM30CPA0ZSE6 113 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 LEUTXA8MZ59 168 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 SRRM5B3KS81 715 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 TNFSF12O43508 249 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 LUMP51884 338 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 RPS23P62266 143 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 TMEM108Q6UXF1 575 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 MOGAT3Q86VF5 341 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 GCSAMQ8N6F7 178 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 SLC35G3Q8N808 338 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 BOLLQ8N9W6 283 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 SCARB1Q8WTV0 552 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 ITLN1Q8WWA0 313 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 RND1Q92730 232 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 SLC35E4Q6ICL7 350 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 SHARPINQ9H0F6 387 aa14.29□□□□□ -0.12
SHKBP1-216ENST00000598201 ADGRG4Q8IZF6 3080 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 IGKV1D-17A0A075B6S4 117 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 IFNL4K9M1U5 179 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 ABCD4O14678 606 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 PGLYRP1O75594 196 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 PSG2P11465 335 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 CFHR2P36980 270 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 CA7P43166 264 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 RAB14P61106 215 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 UBA52P62987 128 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 TMEM268Q5VZI3 342 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 TPRX1Q8N7U7 411 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 NUP37Q8NFH4 326 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 OR10V1Q8NGI7 309 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 OR10Z1Q8NGY1 313 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 OR1L1Q8NH94 360 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 VKORC1Q9BQB6 163 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 ZNF471Q9BX82 626 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 UBE2J1Q9Y385 318 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 AUP1Q9Y679 476 aa14.28□□□□□ -0.12
SHKBP1-216ENST00000598201 IGHV3OR15-7A0A075B7D8 119 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 C12orf77C9JDV5 145 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 IGLV2-14P01704 120 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 HEXAP06865 529 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 PTAFRP25105 342 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 PRDX2P32119 198 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 GLIPR1P48060 266 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 BSPH1Q075Z2 132 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 FAM53AQ6NSI3 398 aaPredicted RBP14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 BVESQ8NE79 360 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 OR52M1Q8NGK5 317 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 LILRB1Q8NHL6 650 aaPredicted RBP14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 TMEM56Q96MV1 263 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 TMEM56-RWDD3S4R434 201 aa14.27□□□□□ -0.12
SHKBP1-216ENST00000598201 F5H0A9 414 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 HSPA12AO43301 675 aa14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 SCGB1D2O95969 90 aa14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 IGHV1-46P01743 117 aa14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 MBPP02686 304 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 NMBP08949 121 aa14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 PET100P0DJ07 73 aa14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 GABRA2P47869 451 aa14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 CMTM1Q8IZ96 169 aa14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 SELENOHQ8IZQ5 122 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 AQP10Q96PS8 301 aa14.27□□□□□ -0.13
SHKBP1-216ENST00000598201 LSM5Q9Y4Y9 91 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms