RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 HSD17B6O14756 317 aa18.29■□□□□ 0.52
SSBP4-205ENST00000598159 SPINT2O43291 252 aa18.29■□□□□ 0.52
SSBP4-205ENST00000598159 FGF16O43320 207 aa18.29■□□□□ 0.52
SSBP4-205ENST00000598159 CRTAPO75718 401 aaPredicted RBP18.29■□□□□ 0.52
SSBP4-205ENST00000598159 TMEM30BQ3MIR4 351 aa18.29■□□□□ 0.52
SSBP4-205ENST00000598159 C6orf183Q5T699 404 aa18.29■□□□□ 0.52
SSBP4-205ENST00000598159 TRAT1Q6PIZ9 186 aa18.29■□□□□ 0.52
SSBP4-205ENST00000598159 GAPTQ8N292 157 aa18.29■□□□□ 0.52
SSBP4-205ENST00000598159 NKX1-2Q9UD57 310 aaPredicted RBP18.29■□□□□ 0.52
SSBP4-205ENST00000598159 IGHV1-3A0A0C4DH29 117 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 SC5DO75845 299 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 IGKV1D-33P01593 117 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 IGKV1-33P01594 117 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 IL3RAP26951 378 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 GABPB1Q06547 395 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-205ENST00000598159 GPR50Q13585 617 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 EBI3Q14213 229 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 HNF4GQ14541 408 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 SPHARQ15513 63 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 TCTEX1D4Q5JR98 221 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 MOB3BQ86TA1 216 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 TMEM104Q8NE00 496 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 Q96M66 194 aa18.28■□□□□ 0.52
SSBP4-205ENST00000598159 A0A1W2PRX2 142 aa18.27■□□□□ 0.52
SSBP4-205ENST00000598159 UBBP0CG47 229 aa18.27■□□□□ 0.52
SSBP4-205ENST00000598159 GLT8D1Q68CQ7 371 aa18.27■□□□□ 0.52
SSBP4-205ENST00000598159 C5orf56Q8N8D9 126 aa18.27■□□□□ 0.52
SSBP4-205ENST00000598159 WFDC9Q8NEX5 89 aa18.27■□□□□ 0.52
SSBP4-205ENST00000598159 OR4K15Q8NH41 348 aa18.27■□□□□ 0.52
SSBP4-205ENST00000598159 UBALD1Q8TB05 177 aa18.27■□□□□ 0.52
SSBP4-205ENST00000598159 CST11Q9H112 138 aa18.27■□□□□ 0.52
SSBP4-205ENST00000598159 IGHV3-43A0A0B4J1X8 118 aa18.26■□□□□ 0.51
SSBP4-205ENST00000598159 C12orf77C9JDV5 145 aa18.26■□□□□ 0.51
SSBP4-205ENST00000598159 IGHV3-43DP0DP04 118 aa18.26■□□□□ 0.51
SSBP4-205ENST00000598159 SIGIRRQ6IA17 410 aa18.26■□□□□ 0.51
SSBP4-205ENST00000598159 PHYHIPQ92561 330 aa18.26■□□□□ 0.51
SSBP4-205ENST00000598159 ST6GALNAC6Q969X2 333 aa18.26■□□□□ 0.51
SSBP4-205ENST00000598159 TPRKBQ9Y3C4 175 aa18.26■□□□□ 0.51
SSBP4-205ENST00000598159 UBE2QL1A1L167 161 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 PF4V1P10720 104 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 SRMP19623 302 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 VHLP40337 213 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 REG1BP48304 166 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 GP2P55259 537 aaKnown RBP18.25■□□□□ 0.51
SSBP4-205ENST00000598159 INSL4Q14641 139 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 MED22Q15528 200 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 OXLD1Q5BKU9 147 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 STEAP3Q658P3 488 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 SLC25A48Q6ZT89 311 aaKnown RBP18.25■□□□□ 0.51
SSBP4-205ENST00000598159 OR2T10Q8NGZ9 312 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 CHPT1Q8WUD6 406 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 TMED9Q9BVK6 235 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 KCNIP1Q9NZI2 227 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 GNG12Q9UBI6 72 aa18.25■□□□□ 0.51
SSBP4-205ENST00000598159 LSM2Q9Y333 95 aaKnown RBP18.25■□□□□ 0.51
SSBP4-205ENST00000598159 PSMB11A5LHX3 300 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 PDCD6O75340 191 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 HBZP02008 142 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 CD33P20138 364 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 CD1BP29016 333 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 C1orf100Q5SVJ3 147 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 REC114Q7Z4M0 266 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 CEACAM19Q7Z692 300 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 ZNF554Q86TJ5 538 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 LRRTM1Q86UE6 522 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 IZUMO1Q8IYV9 350 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 RTN4IP1Q8WWV3 396 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-205ENST00000598159 EAF1Q96JC9 268 aaPredicted RBP18.24■□□□□ 0.51
SSBP4-205ENST00000598159 MBNL3Q9NUK0 354 aaKnown RBP18.24■□□□□ 0.51
SSBP4-205ENST00000598159 NOTCH3Q9UM47 2321 aa18.24■□□□□ 0.51
SSBP4-205ENST00000598159 TXNL1O43396 289 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 IGHG2P01859 326 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 RCC1P18754 421 aaPredicted RBP18.23■□□□□ 0.51
SSBP4-205ENST00000598159 ZNF134P52741 427 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 ZNF137PP52743 207 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 AQP4P55087 323 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 SLC35A2P78381 396 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 IRF3Q14653 427 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 CT45A1Q5HYN5 189 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 FAM53AQ6NSI3 398 aaPredicted RBP18.23■□□□□ 0.51
SSBP4-205ENST00000598159 C10orf99Q6UWK7 81 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 PRR18Q8N4B5 295 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 ZNF439Q8NDP4 499 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 OR1L1Q8NH94 360 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 CT45A3Q8NHU0 189 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 NRG4Q8WWG1 115 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 FAM46BQ96A09 425 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 NEDD4LQ96PU5 975 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 TAF9BQ9HBM6 251 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 LRRC42Q9Y546 428 aa18.23■□□□□ 0.51
SSBP4-205ENST00000598159 IGHV3-72A0A0B4J1Y9 119 aa18.22■□□□□ 0.51
SSBP4-205ENST00000598159 NCBP2LA6PVI3 153 aaKnown RBP18.22■□□□□ 0.51
SSBP4-205ENST00000598159 MPIG6BO95866 241 aa18.22■□□□□ 0.51
SSBP4-205ENST00000598159 CD37P11049 281 aa18.22■□□□□ 0.51
SSBP4-205ENST00000598159 HSD17B12Q53GQ0 312 aa18.22■□□□□ 0.51
SSBP4-205ENST00000598159 RBM48Q5RL73 367 aaKnown RBP18.22■□□□□ 0.51
SSBP4-205ENST00000598159 FAM27D1Q5T7N8 215 aa18.22■□□□□ 0.51
SSBP4-205ENST00000598159 TGIF2LXQ8IUE1 241 aa18.22■□□□□ 0.51
SSBP4-205ENST00000598159 KCNG3Q8TAE7 436 aa18.22■□□□□ 0.51
SSBP4-205ENST00000598159 DUSP21Q9H596 190 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms