RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 EXTL1Q92935 676 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 TMEM18Q96B42 140 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 A0A0G2JRQ6 117 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 KIAA1324LA8MWY0 1029 aaPredicted RBP13.3□□□□□ -0.28
IRF3-219ENST00000597636 LMO7DNF2Z398 122 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 H0Y980 276 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 TNFSF12O43508 249 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 TUSC2O75896 110 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 OR4A8P0C604 315 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 GALR1P47211 349 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
IRF3-219ENST00000597636 BSXQ3C1V8 233 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 ZNF774Q6NX45 483 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 OR5B12Q96R08 314 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 IGLV3-12A0A075B6K2 115 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 H7BYZ3 331 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 PIAS2O75928 621 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 ZFAND5O76080 213 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 CXCL12P48061 93 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 SERF2P84101 59 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 OR1F12Q8NHA8 337 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 GPR146Q96CH1 333 aa13.3□□□□□ -0.28
IRF3-219ENST00000597636 ZNF737O75373 536 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 G0S2P27469 103 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 HOXA6P31267 233 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 IDH3GP51553 393 aaPredicted RBP13.29□□□□□ -0.28
IRF3-219ENST00000597636 PMS2P11Q13670 270 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 HERPUD1Q15011 391 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 SRSF7Q16629 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
IRF3-219ENST00000597636 IQCJQ1A5X6 159 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 TMEM37Q8WXS4 190 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 UCN2Q96RP3 112 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 PCGF1Q9BSM1 259 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 CACNA1EQ15878 2313 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 MAP1LC3B2A6NCE7 125 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 PGLYRP1O75594 196 aaPredicted RBP13.29□□□□□ -0.28
IRF3-219ENST00000597636 KBTBD11O94819 623 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 VAMP5O95183 116 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 CNOT4O95628 575 aaKnown RBP13.29□□□□□ -0.28
IRF3-219ENST00000597636 FGF5P12034 268 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 CD38P28907 300 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 CCKARP32238 428 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 RPL23P62829 140 aaKnown RBP13.29□□□□□ -0.28
IRF3-219ENST00000597636 HNF4GQ14541 408 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 PLCXD3Q63HM9 321 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 CALHM1Q8IU99 346 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 ZNF525Q8N782 197 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 MAP1LC3BQ9GZQ8 125 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 PPP1R14DQ9NXH3 145 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 CNTRLQ7Z7A1 2325 aa13.29□□□□□ -0.28
IRF3-219ENST00000597636 MRPL41Q8IXM3 137 aaKnown RBP13.28□□□□□ -0.28
IRF3-219ENST00000597636 PIGCQ92535 297 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 SEMA5BQ9P283 1151 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 A0A1W2PR77 199 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 B4E171 279 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 M0R143 59 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 DUX1O43812 170 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 NAPSAO96009 420 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 SLC25A6P12236 298 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 F2RP25116 425 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 TSPAN7P41732 249 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 MEF2BQ02080 365 aaPredicted RBP13.28□□□□□ -0.28
IRF3-219ENST00000597636 ARL16Q0P5N6 197 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 LRRC75BQ2VPJ9 315 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 TMEM41BQ5BJD5 291 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 RHBDD2Q6NTF9 364 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 ZNF611Q8N823 705 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 ZIC4Q8N9L1 334 aa13.28□□□□□ -0.28
IRF3-219ENST00000597636 METTL15P1P0C7V9 234 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 ERVFC1-1P60608 527 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 LPAL2Q16609 132 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 CLEC12BQ2HXU8 276 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 ACTL10Q5JWF8 245 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 PRAMEF20Q5VT98 475 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 TEX38Q6PEX7 206 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 SPEM1Q8N4L4 309 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 PINX1Q96BK5 328 aaKnown RBP13.27□□□□□ -0.28
IRF3-219ENST00000597636 SPACA9Q96E40 222 aaPredicted RBP13.27□□□□□ -0.28
IRF3-219ENST00000597636 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 ZNF391Q9UJN7 358 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 FUT9Q9Y231 359 aa13.27□□□□□ -0.28
IRF3-219ENST00000597636 hCG_38984A0A1B0GV85 526 aa13.27□□□□□ -0.29
IRF3-219ENST00000597636 A0A1W2PPQ1 181 aa13.27□□□□□ -0.29
IRF3-219ENST00000597636 HRASP01112 189 aa13.27□□□□□ -0.29
IRF3-219ENST00000597636 ZNF92Q03936 586 aa13.27□□□□□ -0.29
IRF3-219ENST00000597636 ACOT6Q3I5F7 207 aaPredicted RBP13.27□□□□□ -0.29
IRF3-219ENST00000597636 LHX4Q969G2 390 aa13.27□□□□□ -0.29
IRF3-219ENST00000597636 RPUSD4Q96CM3 377 aaKnown RBP13.27□□□□□ -0.29
IRF3-219ENST00000597636 PLK3Q9H4B4 646 aa13.27□□□□□ -0.29
IRF3-219ENST00000597636 IGKV1-6A0A0C4DH72 117 aa13.26□□□□□ -0.29
IRF3-219ENST00000597636 LRRC3CA6NJW4 275 aa13.26□□□□□ -0.29
IRF3-219ENST00000597636 RELQ04864 619 aaPredicted RBP13.26□□□□□ -0.29
IRF3-219ENST00000597636 IZUMO4Q1ZYL8 232 aa13.26□□□□□ -0.29
IRF3-219ENST00000597636 CYB5R2Q6BCY4 276 aa13.26□□□□□ -0.29
IRF3-219ENST00000597636 GPR137CQ8N3F9 429 aa13.26□□□□□ -0.29
IRF3-219ENST00000597636 RASL10BQ96S79 203 aa13.26□□□□□ -0.29
IRF3-219ENST00000597636 CBLN4Q9NTU7 201 aa13.26□□□□□ -0.29
IRF3-219ENST00000597636 FAM90A10PA6NDY2 464 aa13.26□□□□□ -0.29
IRF3-219ENST00000597636 FAM90A18PA6NE21 464 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms