RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TRAPPC2LQ9UL33 140 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 DSCAML1Q8TD84 2053 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 A0A1W2PPI3 338 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 C12orf77C9JDV5 145 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 CCRL2O00421 344 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 SPINT2O43291 252 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 RGS10O43665 173 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 PDCD6O75340 191 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 SNRNP70P08621 437 aaKnown RBP8.38□□□□□ -1.07
CCDC9-203ENST00000596938 HSPA13P48723 471 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 GNG10P50151 68 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 CD83Q01151 205 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 ZNF816Q0VGE8 651 aaPredicted RBP8.38□□□□□ -1.07
CCDC9-203ENST00000596938 EBI3Q14213 229 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 DIAPH2-AS1Q14236 149 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 TRAM1Q15629 374 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 HSD17B12Q53GQ0 312 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 C6orf183Q5T699 404 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 FAM27D1Q5T7N8 215 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 LIPKQ5VXJ0 399 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 PRSS48Q7RTY5 328 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 CENPVQ7Z7K6 275 aaPredicted RBP8.38□□□□□ -1.07
CCDC9-203ENST00000596938 DRAM1Q8N682 238 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 OR56B4Q8NH76 319 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 KCNG3Q8TAE7 436 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 UFD1Q92890 307 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 ST6GALNAC6Q969X2 333 aa8.38□□□□□ -1.07
CCDC9-203ENST00000596938 CITED2Q99967 270 aaPredicted RBP8.38□□□□□ -1.07
CCDC9-203ENST00000596938 MBNL3Q9NUK0 354 aaKnown RBP8.38□□□□□ -1.07
CCDC9-203ENST00000596938 WNK1Q9H4A3 2382 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 NOTCH1P46531 2555 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 A0A1W2PPE3 182 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 ADARB2-AS1A8MUL3 147 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 SLC22A1O15245 554 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 FGF16O43320 207 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 LPLP06858 475 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 VSIG8P0DPA2 414 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 RCC1P18754 421 aaPredicted RBP8.37□□□□□ -1.07
CCDC9-203ENST00000596938 PSMA1P25786 263 aaKnown RBP8.37□□□□□ -1.07
CCDC9-203ENST00000596938 VHLP40337 213 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 ZNF137PP52743 207 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 RPS27AP62979 156 aaKnown RBP8.37□□□□□ -1.07
CCDC9-203ENST00000596938 MLLT11Q13015 90 aaPredicted RBP8.37□□□□□ -1.07
CCDC9-203ENST00000596938 TMEM95Q3KNT9 176 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 PDLIM3Q53GG5 364 aaPredicted RBP8.37□□□□□ -1.07
CCDC9-203ENST00000596938 HIST2H2BDQ6DRA6 164 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 TMEM91Q6ZNR0 172 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 SLC25A48Q6ZT89 311 aaKnown RBP8.37□□□□□ -1.07
CCDC9-203ENST00000596938 ZNF439Q8NDP4 499 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 OR4K15Q8NH41 348 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 TM2D1Q9BX74 207 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 MOB4Q9Y3A3 225 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 LRRC42Q9Y546 428 aa8.37□□□□□ -1.07
CCDC9-203ENST00000596938 IGHV1-3A0A0C4DH29 117 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 UBE2QL1A1L167 161 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 TMEM14DPA8MWL7 114 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 HSD17B6O14756 317 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 ARL6IP5O75915 188 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 BPNT1O95861 308 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 MPIG6BO95866 241 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 HBZP02008 142 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 HSMCR30P0CW71 290 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 CPEP16870 476 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 IL3RAP26951 378 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 CHATP28329 748 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 HTR2CP28335 458 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 CD1BP29016 333 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 ZNF134P52741 427 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 QRFPP83859 136 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 HES1Q14469 280 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 NSUN5P1Q3KNT7 163 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 CT45A1Q5HYN5 189 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 RBM48Q5RL73 367 aaKnown RBP8.36□□□□□ -1.07
CCDC9-203ENST00000596938 OR10K2Q6IF99 312 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 IZUMO2Q6UXV1 221 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 MOB3BQ86TA1 216 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 LYG1Q8N1E2 194 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 C5orf56Q8N8D9 126 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 OR4F17Q8NGA8 305 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 OR6M1Q8NGM8 313 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 CT45A3Q8NHU0 189 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 UBALD1Q8TB05 177 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 TMEM203Q969S6 136 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 FAM46BQ96A09 425 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 NEDD4LQ96PU5 975 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 OR4F4Q96R69 305 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 MGLLQ99685 303 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 TAF9BQ9HBM6 251 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 KCNIP1Q9NZI2 227 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 GNG12Q9UBI6 72 aa8.36□□□□□ -1.07
CCDC9-203ENST00000596938 KIAA2026Q5HYC2 2103 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 IGHV3-43A0A0B4J1X8 118 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 TXNL1O43396 289 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 IGKV1D-33P01593 117 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 IGKV1-33P01594 117 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 IGHV3-43DP0DP04 118 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 TMEM11P17152 192 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 RANBP1P43487 201 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 REG1BP48304 166 aa8.35□□□□□ -1.07
CCDC9-203ENST00000596938 PSMD7P51665 324 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms