RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 LIN7BQ9HAP6 207 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 IDI2-AS1Q9NZ38 188 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 IL36GQ9NZH8 169 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 GLS2Q9UI32 602 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 STUB1Q9UNE7 303 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 SSR3Q9UNL2 185 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 ING4Q9UNL4 249 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 ZNF281Q9Y2X9 895 aa8.32□□□□□ -1.08
LIG1-213ENST00000596672 TENM3Q9P273 2699 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 LEUTXA8MZ59 168 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 SLC22A1O15245 554 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 SLC31A2O15432 143 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 OR2F2O95006 317 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 SNRNP70P08621 437 aaKnown RBP8.31□□□□□ -1.08
LIG1-213ENST00000596672 OCM2P0CE71 109 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 OCMP0CE72 109 aaPredicted RBP8.31□□□□□ -1.08
LIG1-213ENST00000596672 ZNF182P17025 639 aaPredicted RBP8.31□□□□□ -1.08
LIG1-213ENST00000596672 VDAC2P45880 294 aaPredicted RBP8.31□□□□□ -1.08
LIG1-213ENST00000596672 LOXL3P58215 753 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 TAS2R43P59537 309 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 FABP5Q01469 135 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 MRPL28Q13084 256 aaKnown RBP8.31□□□□□ -1.08
LIG1-213ENST00000596672 RBM39Q14498 530 aaKnown RBP8.31□□□□□ -1.08
LIG1-213ENST00000596672 TIMM50Q3ZCQ8 353 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 DDI2Q5TDH0 399 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 OR52W1Q6IF63 320 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 NDUFA11Q86Y39 141 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 DRAM1Q8N682 238 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 TMEM104Q8NE00 496 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 OR4D6Q8NGJ1 314 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 OR56B4Q8NH76 319 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 OR9G1Q8NH87 305 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 R3HDM4Q96D70 268 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 OR14A2Q96R54 314 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 IFT22Q9H7X7 185 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 TMEM138Q9NPI0 162 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 PITPNC1Q9UKF7 332 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 ST3GAL6Q9Y274 331 aa8.31□□□□□ -1.08
LIG1-213ENST00000596672 STAB2Q8WWQ8 2551 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 IGHV3-43A0A0B4J1X8 118 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 ZNF736B4DX44 427 aaPredicted RBP8.3□□□□□ -1.08
LIG1-213ENST00000596672 PFDN1O60925 122 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 MT-ND4P03905 459 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 IGHV3-43DP0DP04 118 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 SERPINA2P20848 420 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 BDKRB2P30411 391 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 ZNF93P35789 620 aaPredicted RBP8.3□□□□□ -1.08
LIG1-213ENST00000596672 SERPINB10P48595 397 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 GNG10P50151 68 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 ZNF134P52741 427 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 GPR50Q13585 617 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 HNF4GQ14541 408 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 RSU1Q15404 277 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 FAM27D1Q5T7N8 215 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 C22orf42Q6IC83 251 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 ETV3LQ6ZN32 361 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 OSR2Q8N2R0 312 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 WFDC9Q8NEX5 89 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 ZNF596Q8TC21 504 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 CCDC107Q8WV48 283 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 ST6GALNAC6Q969X2 333 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 NOL4LQ96MY1 436 aaPredicted RBP8.3□□□□□ -1.08
LIG1-213ENST00000596672 DERL3Q96Q80 235 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 GPER1Q99527 375 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 DCSTAMPQ9H295 470 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 PALMDQ9NP74 551 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 TXNL4BQ9NX01 149 aaKnown RBP8.3□□□□□ -1.08
LIG1-213ENST00000596672 OR6C3Q9NZP0 311 aa8.3□□□□□ -1.08
LIG1-213ENST00000596672 RCC2Q9P258 522 aaKnown RBP8.3□□□□□ -1.08
LIG1-213ENST00000596672 IGHV3-72A0A0B4J1Y9 119 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 TRDV1A0A1B0GX56 115 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 FUOMA2VDF0 154 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 OR7C1O76099 320 aaPredicted RBP8.29□□□□□ -1.08
LIG1-213ENST00000596672 IGLL1P15814 213 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 REG1BP48304 166 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 Q499Y3 187 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 SLC22A6Q4U2R8 563 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 ZNF497Q6ZNH5 498 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 TMEM91Q6ZNR0 172 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 ZNF329Q86UD4 541 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 GAPTQ8N292 157 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 Q8N6K4 173 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 C5orf56Q8N8D9 126 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 ZNF439Q8NDP4 499 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 DYNC2LI1Q8TCX1 351 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 CAPSLQ8WWF8 208 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 BORCS5Q969J3 196 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 METTL9Q9H1A3 318 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 KCNK15Q9H427 330 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 BANF2Q9H503 90 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 PLSCR3Q9NRY6 295 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 LINC00527Q9UJ94 153 aa8.29□□□□□ -1.08
LIG1-213ENST00000596672 C12orf77C9JDV5 145 aa8.28□□□□□ -1.08
LIG1-213ENST00000596672 TOR1AO14656 332 aa8.28□□□□□ -1.08
LIG1-213ENST00000596672 CLEC2LP0C7M8 214 aa8.28□□□□□ -1.08
LIG1-213ENST00000596672 RCC1P18754 421 aaPredicted RBP8.28□□□□□ -1.08
LIG1-213ENST00000596672 FSTP19883 344 aa8.28□□□□□ -1.08
LIG1-213ENST00000596672 PRRX1P54821 245 aa8.28□□□□□ -1.08
LIG1-213ENST00000596672 KRTAP10-11P60412 298 aa8.28□□□□□ -1.08
LIG1-213ENST00000596672 EBI3Q14213 229 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms