RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 IGHV2-26A0A0B4J1V2 119 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 A0A1W2PRD5 423 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 A0A1W2PRF3 423 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 A0A1W2PRM7 423 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 MEIOCA2RUB1 952 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 TMEM235A6NFC5 223 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 A6NJ64 397 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 POM121CA8CG34 1229 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 HBZP02008 142 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 FCGR3AP08637 254 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 GSTP1P09211 210 aaKnown RBP8.58□□□□□ -1.04
LIG1-210ENST00000596332 SCTP09683 121 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 FAM157CP0CG43 387 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 PAX6P26367 422 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 GLP1RP43220 463 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 GUCA2AQ02747 115 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 CHRFAM7AQ494W8 412 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 ZNF626Q68DY1 528 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 Q6ZS49 121 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 LHFPL4Q7Z7J7 247 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 TRAPPC6BQ86SZ2 158 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 ZNF554Q86TJ5 538 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 OR10A7Q8NGE5 316 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 NUDCD2Q8WVJ2 157 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 LEAP2Q969E1 77 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 ARL11Q969Q4 196 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 ABHD1Q96SE0 405 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 CMSS1Q9BQ75 279 aaKnown RBP8.58□□□□□ -1.04
LIG1-210ENST00000596332 PARP12Q9H0J9 701 aaKnown RBP8.58□□□□□ -1.04
LIG1-210ENST00000596332 ANAPC10Q9UM13 185 aa8.58□□□□□ -1.04
LIG1-210ENST00000596332 A0A0U1RQK1 487 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 MDFIC2A0A1B0GVS7 189 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 FAM172BPA6NC97 362 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 SERPINE3A8MV23 424 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 NPFFO15130 113 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 SLC31A2O15432 143 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 IGHV3-7P01780 117 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 EPHA1P21709 976 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 FPR2P25090 351 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 MNDAP41218 407 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 TAS2R20P59543 309 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 GNMTQ14749 295 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 FAM189A2Q15884 450 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 SRSF7Q16629 238 aaKnown RBP eCLIP8.57□□□□□ -1.04
LIG1-210ENST00000596332 DEFB112Q30KQ8 113 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 LDLRAD3Q86YD5 345 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 LAX1Q8IWV1 398 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 ABHD12Q8N2K0 398 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 OR52L2PQ8NGH6 319 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 OR52M1Q8NGK5 317 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 OR4P4Q8NGL7 312 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 PIFOQ8TCI5 191 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 MAFIPQ8WZ33 124 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 GCDHQ92947 438 aaPredicted RBP8.57□□□□□ -1.04
LIG1-210ENST00000596332 S100A16Q96FQ6 103 aaKnown RBP8.57□□□□□ -1.04
LIG1-210ENST00000596332 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 SUCNR1Q9BXA5 334 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 TOLLIPQ9H0E2 274 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 GAL3ST2Q9H3Q3 398 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 RIMS4Q9H426 269 aaPredicted RBP8.57□□□□□ -1.04
LIG1-210ENST00000596332 HEXA-AS1Q9H8Q6 139 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 ESM1Q9NQ30 184 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 GFOD1Q9NXC2 390 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 TRAPPC2LQ9UL33 140 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 PSG11Q9UQ72 335 aa8.57□□□□□ -1.04
LIG1-210ENST00000596332 FBN1P35555 2871 aaKnown RBP8.57□□□□□ -1.04
LIG1-210ENST00000596332 IGHV3-43A0A0B4J1X8 118 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 A0A1W2PPH5 198 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 PROP1O75360 226 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 CD3GP09693 182 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 GSTT2P0CG29 244 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 GSTT2BP0CG30 244 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 IGHV3-43DP0DP04 118 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 SRD5A1P18405 259 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 COX7A1P24310 79 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 SAA4P35542 130 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 BPIFB3P59826 476 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 HTD2P86397 168 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 DIAPH2-AS1Q14236 149 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 PNLIPRP3Q17RR3 467 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 MORN2Q502X0 79 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 FBLN7Q53RD9 439 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 CT45A1Q5HYN5 189 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 NCR3LG1Q68D85 454 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 ODF3L1Q8IXM7 274 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 GVQW1Q8N7I0 195 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 CT45A3Q8NHU0 189 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 ST6GALNAC6Q969X2 333 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 SLC6A7Q99884 636 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 AGMATQ9BSE5 352 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 DCUN1D5Q9BTE7 237 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 C12orf4Q9NQ89 552 aa8.56□□□□□ -1.04
LIG1-210ENST00000596332 A0A1W2PPE3 182 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 TRDCB7Z8K6 153 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 J3QR06 171 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 SCGNO76038 276 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 VENTXO95231 258 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 NAT1P18440 290 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 DTYMKP23919 212 aa8.55□□□□□ -1.04
LIG1-210ENST00000596332 TNFSF8P32971 234 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms