RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 LOXL3P58215 753 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 NCS1P62166 190 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 FAM189A2Q15884 450 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 LRRC75BQ2VPJ9 315 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 TIMM50Q3ZCQ8 353 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 IDNKQ5T6J7 187 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 C16orf87Q6PH81 154 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 OR56B1Q8NGI3 324 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 OR5H6Q8NGV6 325 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 SETD6Q8TBK2 473 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 MRPS26Q9BYN8 205 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 NAA50Q9GZZ1 169 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 DPAGT1Q9H3H5 408 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 TAF9BQ9HBM6 251 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 CHMP1AQ9HD42 196 aaPredicted RBP11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 MBNL3Q9NUK0 354 aaKnown RBP11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 PSG11Q9UQ72 335 aa11.14□□□□□ -0.63
SHKBP1-207ENST00000595631 COL6A5A8TX70 2615 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 A0A075B6Q4 140 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 H3BUI4 141 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 J3QR06 171 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 RAB27BO00194 218 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 F2RL2O00254 374 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 NAPSAO96009 420 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 RAB6AP20340 208 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 HTR1DP28221 377 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 GNMTQ14749 295 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 HLA-DRB5Q30154 266 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 C6orf183Q5T699 404 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 MINOS1Q5TGZ0 78 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 GDPGP1Q6ZNW5 385 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 SLC16A12Q6ZSM3 486 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 Q6ZTK2 550 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 OR10V1Q8NGI7 309 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 OR9G1Q8NH87 305 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 ZNF596Q8TC21 504 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 PIFOQ8TCI5 191 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 MALSU1Q96EH3 234 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 ATG5Q9H1Y0 275 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 VPREB3Q9UKI3 123 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 KCNK7Q9Y2U2 307 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 MINOS1-NBL1R4GNA1 71 aa11.13□□□□□ -0.63
SHKBP1-207ENST00000595631 TMEM89A2RUT3 159 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 BUB1B-PAK6H3BSN5 160 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 SLC31A2O15432 143 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 SPINT2O43291 252 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 TFAP2AP05549 437 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 HKR1P10072 659 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 GNB3P16520 340 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 RPS19P39019 145 aaKnown RBP11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 ALDH3B2P48448 385 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 PRRX1P54821 245 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 VBP1P61758 197 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 RELBQ01201 579 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 DIAPH2-AS1Q14236 149 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 OR10A7Q8NGE5 316 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 OR10R2Q8NGX6 335 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 GCDHQ92947 438 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 RAB3CQ96E17 227 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 MMP28Q9H239 520 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 DPM3Q9P2X0 92 aa11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 ELF5Q9UKW6 265 aaPredicted RBP11.12□□□□□ -0.63
SHKBP1-207ENST00000595631 BTBD17A6NE02 478 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 LEUTXA8MZ59 168 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 LY6LH3BQJ8 138 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 MFNGO00587 321 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 CHST1O43916 411 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 CD24P25063 80 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 RANBP1P43487 201 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 SERPINB10P48595 397 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 HMGN3Q15651 99 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 FBLN7Q53RD9 439 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 TPTE2P1Q5T6R2 138 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 ZNF880Q6PDB4 577 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 TRAT1Q6PIZ9 186 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 OR52M1Q8NGK5 317 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 OR5R1Q8NH85 324 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 SLC25A38Q96DW6 304 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 CMSS1Q9BQ75 279 aaKnown RBP11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 KCNIP1Q9NZI2 227 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 C1RLQ9NZP8 487 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 GNG12Q9UBI6 72 aa11.11□□□□□ -0.63
SHKBP1-207ENST00000595631 HIST1H1DP16402 221 aaKnown RBP11.1□□□□□ -0.63
SHKBP1-207ENST00000595631 GPR107Q5VW38 600 aa11.1□□□□□ -0.63
SHKBP1-207ENST00000595631 CCBE1Q6UXH8 406 aaPredicted RBP11.1□□□□□ -0.63
SHKBP1-207ENST00000595631 TMEM219Q86XT9 240 aa11.1□□□□□ -0.63
SHKBP1-207ENST00000595631 ZNF439Q8NDP4 499 aa11.1□□□□□ -0.63
SHKBP1-207ENST00000595631 PTX4Q96A99 478 aa11.1□□□□□ -0.63
SHKBP1-207ENST00000595631 C12orf4Q9NQ89 552 aa11.1□□□□□ -0.63
SHKBP1-207ENST00000595631 OR2S2Q9NQN1 319 aa11.1□□□□□ -0.63
SHKBP1-207ENST00000595631 TRBV6-6A0A0A6YYG2 114 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 METTL21EPA6NDL7 271 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 VGLL3A8MV65 326 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 CRYBA1P05813 215 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 CD3GP09693 182 aa11.09□□□□□ -0.63
SHKBP1-207ENST00000595631 MDKP21741 143 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms