RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 NXPH2O95156 264 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 PATE4P0C8F1 98 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 SELEP16581 610 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 OTX1P32242 354 aaPredicted RBP13.22□□□□□ -0.29
PNKP-204ENST00000594661 OR3A4PP47883 348 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 DEFB109BQ30KR1 87 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 DNAJC4Q9NNZ3 241 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 SPRR3Q9UBC9 169 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 AKAP13Q12802 2813 aa13.22□□□□□ -0.29
PNKP-204ENST00000594661 K7EP13 123 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 MRPL33O75394 65 aaKnown RBP13.21□□□□□ -0.29
PNKP-204ENST00000594661 SCGNO76038 276 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 HSPB1P04792 205 aaKnown RBP13.21□□□□□ -0.29
PNKP-204ENST00000594661 GNB3P16520 340 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 HNF1AP20823 631 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 FUT3P21217 361 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 RTP5Q14D33 572 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 RSPO4Q2I0M5 234 aaPredicted RBP13.21□□□□□ -0.29
PNKP-204ENST00000594661 DMRTC1Q5HYR2 192 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 TMEM18Q96B42 140 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 ACY3Q96HD9 319 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 ZDHHC11Q9H8X9 412 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 CALHM2Q9HA72 323 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 FBLN5Q9UBX5 448 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 TUBD1Q9UJT1 453 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 OSGIN2Q9Y236 505 aa13.21□□□□□ -0.29
PNKP-204ENST00000594661 IGKV1-9A0A0C4DH69 117 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 CLDN34H7C241 214 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 M0R135 149 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 MPIG6BO95866 241 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 IGLV3-1P01715 115 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 ZNF32P17041 273 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 IDH3GP51553 393 aaPredicted RBP13.21□□□□□ -0.3
PNKP-204ENST00000594661 RND3P61587 244 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 COL10A1Q03692 680 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 IGFL2Q6UWQ7 119 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 SLC24A4Q8NFF2 622 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 FGFBP3Q8TAT2 258 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 SPTSSAQ969W0 71 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 ZNF799Q96GE5 643 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 NICN1Q9BSH3 213 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 PRRG4Q9BZD6 226 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 SRD5A3Q9H8P0 318 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 WFDC1Q9HC57 220 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 MSL2Q9HCI7 577 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 SLC7A10Q9NS82 523 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 KIAA1456Q9P272 454 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 LAMA5O15230 3695 aa13.21□□□□□ -0.3
PNKP-204ENST00000594661 TRGV5A0A0B4J1U4 118 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 A0A0U1RQV5 110 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 SYNGR3O43761 229 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 MMP7P09237 267 aaPredicted RBP13.2□□□□□ -0.3
PNKP-204ENST00000594661 RAC2P15153 192 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 FPR2P25090 351 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 SELENOTP62341 195 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 HLA-DRB3P79483 266 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 VAX1Q5SQQ9 334 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 LEMD1Q68G75 181 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 ETFRF1Q6IPR1 90 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 FAM185AQ8N0U4 392 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 SCGB3A2Q96PL1 93 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 RTBDNQ9BSG5 229 aaPredicted RBP13.2□□□□□ -0.3
PNKP-204ENST00000594661 LPAR5Q9H1C0 372 aa13.2□□□□□ -0.3
PNKP-204ENST00000594661 XKRY2A2RUG3 117 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 FIGNL2A6NMB9 653 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 ZNF891A8MT65 544 aaPredicted RBP13.19□□□□□ -0.3
PNKP-204ENST00000594661 DHRS3O75911 302 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 CRYGSP22914 178 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 OR5I1Q13606 314 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 SP5Q6BEB4 398 aaPredicted RBP13.19□□□□□ -0.3
PNKP-204ENST00000594661 SPSB3Q6PJ21 355 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 CLEC2AQ6UVW9 174 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 RTN4RL2Q86UN3 420 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 KCNG3Q8TAE7 436 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 FAM213BQ8TBF2 198 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 WDYHV1Q96HA8 205 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 C1orf147Q96MC9 270 aaPredicted RBP13.19□□□□□ -0.3
PNKP-204ENST00000594661 HIST1H2AAQ96QV6 131 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 SH3BGRL3Q9H299 93 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 BANF2Q9H503 90 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 ANAPC10Q9UM13 185 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 OPN1MWP04001 364 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 OPN1MW2P0DN77 364 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 OPN1MW3P0DN78 364 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 FAHP16930 419 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 CCL20P78556 96 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 ICAM4Q14773 271 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 SNAI3Q3KNW1 292 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 ZNF506Q5JVG8 444 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 ZNF705AQ6ZN79 300 aaPredicted RBP13.19□□□□□ -0.3
PNKP-204ENST00000594661 SSX7Q7RTT5 188 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 CYB561D1Q8N8Q1 229 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 WFIKKN1Q96NZ8 548 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 NUDT16L1Q9BRJ7 211 aaKnown RBP13.19□□□□□ -0.3
PNKP-204ENST00000594661 TMEM59Q9BXS4 323 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 PIGLQ9Y2B2 252 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 FAM186AA6NE01 2351 aa13.19□□□□□ -0.3
PNKP-204ENST00000594661 FREM1Q5H8C1 2179 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 A0A0A6YYD4 124 aa13.18□□□□□ -0.3
PNKP-204ENST00000594661 A0A1W2PP11 408 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms