RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CER1O95813 267 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 SRSF7Q16629 238 aaKnown RBP eCLIP14.08□□□□□ -0.16
LIG1-206ENST00000594067 MPV17LQ2QL34 196 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 NRN1LQ496H8 165 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 C6orf15Q6UXA7 325 aaPredicted RBP14.08□□□□□ -0.16
LIG1-206ENST00000594067 SAXO1Q8IYX7 474 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 CMTM1Q8IZ96 169 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 TAAR3PQ9P1P4 343 aa14.08□□□□□ -0.16
LIG1-206ENST00000594067 IGKV3D-15A0A087WSY6 115 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 CLEC18AA5D8T8 446 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 H3BP45 60 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 CEACAM1P13688 526 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 LHX2P50458 406 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 SSPNQ14714 243 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 CLEC18CQ8NCF0 446 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 MRPL30Q8TCC3 161 aaKnown RBP14.07□□□□□ -0.16
LIG1-206ENST00000594067 ABHD5Q8WTS1 349 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 LINC00470Q9BZP3 86 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 OR51B6Q9H340 312 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 TRIOBPQ9H2D6 2365 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 CELSR3Q9NYQ7 3312 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 FAM166BA8MTA8 275 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 PPP1R2P9O14990 202 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 HOXA6P31267 233 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 PAX9P55771 341 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 RPL23AP62750 156 aaKnown RBP14.07□□□□□ -0.16
LIG1-206ENST00000594067 IGFBP7Q16270 282 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 IZUMO4Q1ZYL8 232 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 PDZD11Q5EBL8 140 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 AKR1C8PQ5T2L2 129 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 PCSK4Q6UW60 755 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 C17orf78Q8N4C9 275 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 OR13D1Q8NGV5 346 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 OR51H1Q8NH63 302 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 APOBEC3DQ96AK3 386 aaPredicted RBP14.07□□□□□ -0.16
LIG1-206ENST00000594067 RBMXL1Q96E39 390 aaKnown RBP14.07□□□□□ -0.16
LIG1-206ENST00000594067 ABHD14BQ96IU4 210 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 HIST1H2AAQ96QV6 131 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 LOXL2Q9Y4K0 774 aa14.07□□□□□ -0.16
LIG1-206ENST00000594067 B4E171 279 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 LILRA1O75019 489 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 TSPAN7P41732 249 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 HLA-DRB3P79483 266 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 KHDC3LQ587J8 217 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 P4HA3Q7Z4N8 544 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 OR5D13Q8NGL4 314 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 C14orf144Q96I85 54 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 DUXBA0A1W2PPF3 345 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 H0Y980 276 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 CLDN18P56856 261 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 TLE4Q04727 773 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 OR2M7Q8NG81 312 aa14.06□□□□□ -0.16
LIG1-206ENST00000594067 CD300LBA8K4G0 201 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 CTXN2P0C2S0 81 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 TRGC1P0CF51 173 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 TDGF1P13385 188 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 BAXQ07812 192 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 OR2T2Q6IF00 324 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 TMEM105Q8N8V8 129 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 OR5A2Q8NGI9 324 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 FRZBQ92765 325 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 GPR146Q96CH1 333 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 RHOVQ96L33 236 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 ZNF703Q9H7S9 590 aaPredicted RBP14.05□□□□□ -0.16
LIG1-206ENST00000594067 RNF115Q9Y4L5 304 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 ELOA3CA0A087WX78 387 aaPredicted RBP14.05□□□□□ -0.16
LIG1-206ENST00000594067 NEURL1O76050 574 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 SYNGR4O95473 234 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 F2RP25116 425 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 NKX6-1P78426 367 aaPredicted RBP14.05□□□□□ -0.16
LIG1-206ENST00000594067 ATP5SQ99766 215 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 GFOD1Q9NXC2 390 aa14.05□□□□□ -0.16
LIG1-206ENST00000594067 TRAV39A0A0B4J263 110 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 HBE1P02100 147 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 PSG2P11465 335 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 MAGEA5P43359 124 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 TAS2R30P59541 319 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 ZXDAP98168 799 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 TMEM267Q0VDI3 215 aaPredicted RBP14.04□□□□□ -0.16
LIG1-206ENST00000594067 LPAL2Q16609 132 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 FAM173AQ9BQD7 235 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 ERRFI1Q9UJM3 462 aaPredicted RBP14.04□□□□□ -0.16
LIG1-206ENST00000594067 ZNF407Q9C0G0 2248 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 TRAV24A0A0B4J272 114 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 LOC102723971A0A1B0GUV8 181 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 OR5H1A6NKK0 313 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 B4DEV8 164 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 MMP9P14780 707 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 CD200P41217 278 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 GAMTQ14353 236 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 C3AR1Q16581 482 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 FAM90A2PQ658T7 463 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 ZNF324BQ6AW86 544 aaPredicted RBP14.04□□□□□ -0.16
LIG1-206ENST00000594067 OR10G4Q8NGN3 311 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 IL1F10Q8WWZ1 152 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 FAM210BQ96KR6 192 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 POM121L2Q96KW2 1035 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 R4GN57 208 aa14.04□□□□□ -0.16
LIG1-206ENST00000594067 TRAV1-1A0A0B4J248 108 aa14.03□□□□□ -0.16
LIG1-206ENST00000594067 ARGFXA6NJG6 315 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms