RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NAPGQ99747 312 aaPredicted RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 CADM1Q9BY67 442 aaKnown RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 TMEM14BQ9NUH8 114 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 THAP1Q9NVV9 213 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 ASIC5Q9NY37 505 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 RCC2Q9P258 522 aaKnown RBP2.04□□□□□ -2.08
VRK3-204ENST00000593912 DKK2Q9UBU2 259 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 KIF25Q9UIL4 384 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 ZNF180Q9UJW8 692 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 HSF4Q9ULV5 492 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 IER3IP1Q9Y5U9 82 aa2.04□□□□□ -2.08
VRK3-204ENST00000593912 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 IGKV1-27A0A075B6S5 117 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 MEIKINA0A087WXM9 373 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 DHRS12A0PJE2 317 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 FUOMA2VDF0 154 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 PRORSD1PA6NEY8 169 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 NPIPB11E5RHQ5 1161 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 PLIN3O60664 434 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 NRASP01111 189 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 REG1AP05451 166 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 FGF4P08620 206 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 C8orf88P0DMB2 117 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 T-ENOLP0DO92 83 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 RPA2P15927 270 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 PRKACAP17612 351 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 BCL3P20749 454 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 IL3RAP26951 378 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 C21orf33P30042 268 aaPredicted RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 MAGEA2P43356 314 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 CDKN1BP46527 198 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 ZNF134P52741 427 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 CRISP1P54107 249 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 FXYD6P3P58550 94 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 TAS2R41P59536 307 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 DNAJB13P59910 316 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 ATP5G2Q06055 141 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 IL24Q13007 206 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 MAD2L1Q13257 205 aaPredicted RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 FXYD3Q14802 87 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 PTGES3Q15185 160 aaKnown RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 ANKDD1AQ495B1 522 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 FAM106AQ4KMX7 169 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 GCNT6Q5T4J0 391 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 ZNF684Q5T5D7 378 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 C19orf35Q6ZS72 473 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 SLC25A48Q6ZT89 311 aaKnown RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 SLC25A26Q70HW3 274 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 ADCK1Q86TW2 530 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 GPHB5Q86YW7 130 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 MFSD4AQ8N468 514 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 MREGQ8N565 214 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 LINC00311Q8N616 119 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 ADAD2Q8NCV1 583 aaKnown RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 OR4K13Q8NH42 304 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 NTN5Q8WTR8 489 aaPredicted RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 PPP1R14BQ96C90 147 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 ASB9Q96DX5 294 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 LINC01600Q96MT4 127 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 AMELYQ99218 206 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 CHAC1Q9BUX1 264 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 PBOV1Q9GZY1 135 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 MAGT1Q9H0U3 335 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 DPH3P1Q9H4G8 78 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 C5orf66Q9H5L9 145 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 NIPAL2Q9H841 368 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 SEPSECSQ9HD40 501 aaKnown RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 EXOSC4Q9NPD3 245 aaKnown RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 SLC2A9Q9NRM0 540 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 INTS9Q9NV88 658 aaKnown RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 FAM206AQ9NX38 181 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 THUMPD1Q9NXG2 353 aaKnown RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 METTL1Q9UBP6 276 aaKnown RBP2.03□□□□□ -2.08
VRK3-204ENST00000593912 CACNG5Q9UF02 275 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 RIMS3Q9UJD0 308 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 GSTK1Q9Y2Q3 226 aa2.03□□□□□ -2.08
VRK3-204ENST00000593912 IGHV3OR16-8A0A075B7F1 116 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 FAM230AA0A1W2PPH8 454 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 LRCOL1A6NCL2 159 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 KNCNA6PVL3 124 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 FAM90A23PA8MXZ1 464 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 F5H768 121 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 M0QX08 132 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 CLIC1O00299 241 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 SLC33A1O00400 549 aaPredicted RBP2.02□□□□□ -2.09
VRK3-204ENST00000593912 SDCBPO00560 298 aaPredicted RBP2.02□□□□□ -2.09
VRK3-204ENST00000593912 TXNL1O43396 289 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 ZNF207O43670 478 aaKnown RBP2.02□□□□□ -2.09
VRK3-204ENST00000593912 IDH3BO43837 385 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 MRPS14O60783 128 aaKnown RBP2.02□□□□□ -2.09
VRK3-204ENST00000593912 CCDC22O60826 627 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 SERPINB7O75635 380 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 TUSC2O75896 110 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 OR2J3O76001 311 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 CRYGCP07315 174 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 DBTP11182 482 aaKnown RBP2.02□□□□□ -2.09
VRK3-204ENST00000593912 ZNF44P15621 663 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 HIST1H1CP16403 213 aaKnown RBP2.02□□□□□ -2.09
VRK3-204ENST00000593912 ARL3P36405 182 aa2.02□□□□□ -2.09
VRK3-204ENST00000593912 MAP2K3P46734 347 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms