RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 OR4X2Q8NGF9 303 aa10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 OR52M1Q8NGK5 317 aa10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 MRPS24Q96EL2 167 aaKnown RBP10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 SELENOIQ9C0D9 397 aa10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 FKBP14Q9NWM8 211 aa10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 GFOD1Q9NXC2 390 aa10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 ETAA1Q9NY74 926 aa10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 TRAPPC2LQ9UL33 140 aa10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 TSSC4Q9Y5U2 329 aaPredicted RBP10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 PEX16Q9Y5Y5 336 aa10.4□□□□□ -0.74
PRKCSH-218ENST00000593053 IGHV3-72A0A0B4J1Y9 119 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 C12orf77C9JDV5 145 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 GAPDHP04406 335 aaKnown RBP10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 SMIM18P0DKX4 95 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 MGMTP16455 207 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 MAPK3P27361 379 aaPredicted RBP10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 LOXL3P58215 753 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 ZNF816Q0VGE8 651 aaPredicted RBP10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 SYT6Q5T7P8 510 aaPredicted RBP10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 PRR18Q8N4B5 295 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 NKAIN3Q8N8D7 197 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 C5orf56Q8N8D9 126 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 OR4K15Q8NH41 348 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 THRSPQ92748 146 aa10.39□□□□□ -0.75
PRKCSH-218ENST00000593053 IGHV1-3A0A0C4DH29 117 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 PSMB11A5LHX3 300 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 PTGES3LE9PB15 166 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 SLC31A2O15432 143 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 SPINT2O43291 252 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 FGF16O43320 207 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 CDK1P06493 297 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 CD33P20138 364 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 FUT3P21217 361 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 ACSM3Q53FZ2 586 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 C6orf183Q5T699 404 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 LINC00311Q8N616 119 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 C8orf31Q8N9H6 132 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 OR10V1Q8NGI7 309 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 SGCDQ92629 289 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 FAM46BQ96A09 425 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 CYYR1Q96J86 154 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 Q96M66 194 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 UQCC2Q9BRT2 126 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 TMED9Q9BVK6 235 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 MND1Q9BWT6 205 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 GNG12Q9UBI6 72 aa10.38□□□□□ -0.75
PRKCSH-218ENST00000593053 UBE2QL1A1L167 161 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 FAM90A10PA6NDY2 464 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 FAM90A7PA6NKC0 464 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 FAM90A23PA8MXZ1 464 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 HBZP02008 142 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 PF4P02776 101 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 IGLL1P15814 213 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 RCC1P18754 421 aaPredicted RBP10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 IL3RAP26951 378 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 GPR50Q13585 617 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 EBI3Q14213 229 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 C6orf141Q5SZD1 244 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 FAM27D1Q5T7N8 215 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 RNLSQ5VYX0 342 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 SIGIRRQ6IA17 410 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 ZNF329Q86UD4 541 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 GAPTQ8N292 157 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 OR1L1Q8NH94 360 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 RTN4IP1Q8WWV3 396 aaPredicted RBP10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 EAF1Q96JC9 268 aaPredicted RBP10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 NOL4LQ96MY1 436 aaPredicted RBP10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 Q9H521 79 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 RAB9BQ9NP90 201 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 GHRLQ9UBU3 117 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 LINC00527Q9UJ94 153 aa10.37□□□□□ -0.75
PRKCSH-218ENST00000593053 NCBP2LA6PVI3 153 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 SERPINE3A8MV23 424 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 PDCD6O75340 191 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 CA11O75493 328 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 SC5DO75845 299 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 MPIG6BO95866 241 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 GLAP06280 429 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 GP2P55259 537 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 SPHARQ15513 63 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 TMEM30BQ3MIR4 351 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 UNQ9370/PRO34162Q6UXP9 181 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 SLC25A48Q6ZT89 311 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 IZUMO1Q8IYV9 350 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 MS4A15Q8N5U1 240 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 ZNF439Q8NDP4 499 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 WFDC9Q8NEX5 89 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 OR2T10Q8NGZ9 312 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 ST6GALNAC6Q969X2 333 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 PHF21AQ96BD5 680 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 CST11Q9H112 138 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 TAF9BQ9HBM6 251 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 NECAP2Q9NVZ3 263 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 SCN3BQ9NY72 215 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 LSM2Q9Y333 95 aaKnown RBP10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 NOTCH3Q9UM47 2321 aa10.36□□□□□ -0.75
PRKCSH-218ENST00000593053 ZNF736B4DX44 427 aaPredicted RBP10.35□□□□□ -0.75
PRKCSH-218ENST00000593053 ZNF134P52741 427 aa10.35□□□□□ -0.75
PRKCSH-218ENST00000593053 MED22Q15528 200 aa10.35□□□□□ -0.75
PRKCSH-218ENST00000593053 Q3ZCU0 254 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms