RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 JMJD8Q96S16 334 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 ZMAT3Q9HA38 289 aaKnown RBP12.15□□□□□ -0.46
DDX39A-221ENST00000593026 ZNF286AQ9HBT8 521 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 KCNK7Q9Y2U2 307 aa12.15□□□□□ -0.46
DDX39A-221ENST00000593026 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 A0A087X0M5 115 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 TRBV6-6A0A0A6YYG2 114 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 A0A1B0GX30 115 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 F2RL2O00254 374 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 SDCBPO00560 298 aaPredicted RBP12.14□□□□□ -0.47
DDX39A-221ENST00000593026 TOR1AO14656 332 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 HBZP02008 142 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 TMEM30BQ3MIR4 351 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 UBE2NLQ5JXB2 153 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 OR1L1Q8NH94 360 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 ZNF596Q8TC21 504 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 ACOT12Q8WYK0 555 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 AP3S1Q92572 193 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 ISOC1Q96CN7 298 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 ABCG5Q9H222 651 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 PRDM13Q9H4Q3 707 aa12.14□□□□□ -0.47
DDX39A-221ENST00000593026 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDX39A-221ENST00000593026 TBL2Q9Y4P3 447 aaKnown RBP12.14□□□□□ -0.47
DDX39A-221ENST00000593026 CUBNO60494 3623 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 A0A0A6YYH2 397 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 A6NJ64 397 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 POM121CA8CG34 1229 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 H3BMQ9 156 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 SOX6P35712 828 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 BAMBIQ13145 260 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 ARFRP1Q13795 201 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 HMGN3Q15651 99 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 CDNFQ49AH0 187 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 UTF1Q5T230 341 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 ZNF880Q6PDB4 577 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 Q6YL49 198 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 Q6ZPA2 131 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 LHFPL4Q7Z7J7 247 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 OR52M1Q8NGK5 317 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 OR9G1Q8NH87 305 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 C17orf50Q8WW18 174 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 LEAP2Q969E1 77 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 DIABLOQ9NR28 239 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 COMMD3Q9UBI1 195 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 GNG12Q9UBI6 72 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 MGAT4AQ9UM21 535 aa12.13□□□□□ -0.47
DDX39A-221ENST00000593026 IGHV3-43A0A0B4J1X8 118 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 DNAJC9-AS1A6NH13 148 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 VENTXO95231 258 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 IGLV1-47P01700 117 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 IGHV3-7P01780 117 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 MELTFP08582 738 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 FCGR3AP08637 254 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 GSTP1P09211 210 aaKnown RBP12.12□□□□□ -0.47
DDX39A-221ENST00000593026 IGHV3-43DP0DP04 118 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 ZNF182P17025 639 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-221ENST00000593026 HTR1DP28221 377 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 TALDO1P37837 337 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 GNG10P50151 68 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 PRRX1P54821 245 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 LOXL3P58215 753 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 MINOS1Q5TGZ0 78 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 MZT2AQ6P582 158 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 LDLRAD3Q86YD5 345 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 BEND2Q8NDZ0 799 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 OR4P4Q8NGL7 312 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 GALMQ96C23 342 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 S100A16Q96FQ6 103 aaKnown RBP12.12□□□□□ -0.47
DDX39A-221ENST00000593026 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 Q9N2K0 584 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 GFOD1Q9NXC2 390 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 PSG11Q9UQ72 335 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 CEPT1Q9Y6K0 416 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 MINOS1-NBL1R4GNA1 71 aa12.12□□□□□ -0.47
DDX39A-221ENST00000593026 TRAV18A0A075B6X5 111 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 TMEM235A6NFC5 223 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 HOXA3O43365 443 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-221ENST00000593026 HLA-DRB3P79483 266 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 SRSF2Q01130 221 aaKnown RBP12.11□□□□□ -0.47
DDX39A-221ENST00000593026 PNLIPRP3Q17RR3 467 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 ZNF260Q3ZCT1 412 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 HACD4Q5VWC8 232 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 C5orf24Q7Z6I8 188 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 ZDHHC22Q8N966 263 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 DYNC2LI1Q8TCX1 351 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 SSMEM1Q8WWF3 244 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 IL1F10Q8WWZ1 152 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 MALSU1Q96EH3 234 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 DUX5Q96PT3 197 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 MMP28Q9H239 520 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 ESM1Q9NQ30 184 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 OR2S2Q9NQN1 319 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 JPT1Q9UK76 154 aa12.11□□□□□ -0.47
DDX39A-221ENST00000593026 ELF5Q9UKW6 265 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-221ENST00000593026 J3QR06 171 aa12.1□□□□□ -0.47
DDX39A-221ENST00000593026 EIF4EP06730 217 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms