RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 VDAC1P21796 283 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 UCP1P25874 307 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 NPBWR2P48146 333 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 VAMP2P63027 116 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 OR8G1Q15617 311 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 INO80CQ6PI98 192 aaPredicted RBP12.14□□□□□ -0.47
RANBP3-229ENST00000592771 BRICD5Q6PL45 260 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 CLEC9AQ6UXN8 241 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 TBC1D26Q86UD7 250 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 MYPOPQ86VE0 399 aaPredicted RBP12.14□□□□□ -0.47
RANBP3-229ENST00000592771 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 SELENOHQ8IZQ5 122 aaKnown RBP12.14□□□□□ -0.47
RANBP3-229ENST00000592771 ZFP82Q8N141 532 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 HSD17B11Q8NBQ5 300 aa12.14□□□□□ -0.47
RANBP3-229ENST00000592771 TRBV6-6A0A0A6YYG2 114 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 EIF3GO75821 320 aaKnown RBP eCLIP12.13□□□□□ -0.47
RANBP3-229ENST00000592771 WNT2P09544 360 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 S100GP29377 79 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 PLA2G5P39877 138 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 GPM6AP51674 278 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 UBE2NP61088 152 aaKnown RBP12.13□□□□□ -0.47
RANBP3-229ENST00000592771 SNRPEP62304 92 aaKnown RBP12.13□□□□□ -0.47
RANBP3-229ENST00000592771 ID3Q02535 119 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 MEX3BQ6ZN04 569 aaKnown RBP12.13□□□□□ -0.47
RANBP3-229ENST00000592771 Q6ZPA2 131 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 MKXQ8IYA7 352 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 USB1Q9BQ65 265 aaKnown RBP12.13□□□□□ -0.47
RANBP3-229ENST00000592771 PARP12Q9H0J9 701 aaKnown RBP12.13□□□□□ -0.47
RANBP3-229ENST00000592771 SH3BGRL3Q9H299 93 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 KIAA1456Q9P272 454 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 DKK4Q9UBT3 224 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 LHX6Q9UPM6 363 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
RANBP3-229ENST00000592771 LOC400499M0QZD8 3231 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 OR5B21A6NL26 309 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 ANKRD30BLA7E2S9 258 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 KLK10O43240 276 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 LILRA1O75019 489 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 LYZL6O75951 148 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 CELA3BP08861 270 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 SLC25A6P12236 298 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 HAAOP46952 286 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 SULT1A1P50225 295 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 IGSF11Q5DX21 431 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 SOHLH1Q5JUK2 328 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 VWA1Q6PCB0 445 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 TMEM182Q6ZP80 229 aaPredicted RBP12.13□□□□□ -0.47
RANBP3-229ENST00000592771 CMTM1Q8IZ96 169 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 TMEM252Q8N6L7 170 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 SUMF2Q8NBJ7 301 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 NAXEQ8NCW5 288 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 OR5D13Q8NGL4 314 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 OR2G3Q8NGZ4 309 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 FAM213BQ8TBF2 198 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 PLSCR4Q9NRQ2 329 aa12.13□□□□□ -0.47
RANBP3-229ENST00000592771 IGSF23A1L1A6 192 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 SMPD2O60906 423 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 ZNF205O95201 554 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 ACAA1P09110 424 aaPredicted RBP12.12□□□□□ -0.47
RANBP3-229ENST00000592771 BCL3P20749 454 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 ATP6V0CP27449 155 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 FHITP49789 147 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 RAB2AP61019 212 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 NMSQ5H8A3 153 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 ETV3LQ6ZN32 361 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 CNEP1R1Q8N9A8 125 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 HIST1H2AAQ96QV6 131 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 SEBOXQ9HB31 216 aaPredicted RBP12.12□□□□□ -0.47
RANBP3-229ENST00000592771 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 ATP23Q9Y6H3 246 aa12.12□□□□□ -0.47
RANBP3-229ENST00000592771 LRP5LA4QPB2 252 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 RBFOX3A6NFN3 312 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 H0Y980 276 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 TNFSF13O75888 250 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 HBE1P02100 147 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 CBR1P16152 277 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 FOXF2Q12947 444 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 IL24Q13007 206 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 SP5Q6BEB4 398 aaPredicted RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 RBMXL3Q8N7X1 1067 aaKnown RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 WDR31Q8NA23 367 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 MBD3L2Q8NHZ7 208 aaPredicted RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 SLAMF9Q96A28 289 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 RBMXL1Q96E39 390 aaKnown RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 FBXO7Q9Y3I1 522 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 ZFHX4Q86UP3 3567 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 A0A087WWC5 75 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 CGAP01215 116 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 IFNA17P01571 189 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 IGHV2-5P01817 119 aa12.11□□□□□ -0.47
RANBP3-229ENST00000592771 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
RANBP3-229ENST00000592771 POLR2GP62487 172 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms