RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 FIP1L1Q6UN15 594 aaKnown RBP13.29□□□□□ -0.28
MBD1-227ENST00000592060 BEND4Q6ZU67 534 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 NARS2Q96I59 477 aaKnown RBP13.29□□□□□ -0.28
MBD1-227ENST00000592060 FZR1Q9UM11 496 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 FAM215AQ9Y5M1 114 aa13.29□□□□□ -0.28
MBD1-227ENST00000592060 CNOT1A5YKK6 2376 aaKnown RBP13.28□□□□□ -0.28
MBD1-227ENST00000592060 LOC400499M0QZD8 3231 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 PSPNO60542 156 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 ADCYAP1P18509 176 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 PTPRZ1P23471 2315 aaPredicted RBP13.28□□□□□ -0.28
MBD1-227ENST00000592060 POLR2GP62487 172 aaKnown RBP eCLIP13.28□□□□□ -0.28
MBD1-227ENST00000592060 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.28
MBD1-227ENST00000592060 NHLH2Q02577 135 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 ZNF718Q3SXZ3 478 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 PRAMEF6Q5VXH4 476 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 BTNL8Q6UX41 500 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 RBMXL3Q8N7X1 1067 aaKnown RBP13.28□□□□□ -0.28
MBD1-227ENST00000592060 LRRC46Q96FV0 321 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 PARP11Q9NR21 331 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 OR14J1Q9UGF5 321 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 CACNA1AO00555 2505 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 PRR14LQ5THK1 2151 aa13.28□□□□□ -0.28
MBD1-227ENST00000592060 BORCS7-ASMTA0A0B4J1R7 106 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 IGSF23A1L1A6 192 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 S100GP29377 79 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 AKR1C2P52895 323 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 BLOC1S1P78537 153 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 ID3Q02535 119 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 AKR1C1Q04828 323 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 CXorf66Q5JRM2 361 aaPredicted RBP13.27□□□□□ -0.28
MBD1-227ENST00000592060 WDR82Q6UXN9 313 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 ACP7Q6ZNF0 438 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 OR2C3Q8N628 320 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 PARP12Q9H0J9 701 aaKnown RBP13.27□□□□□ -0.28
MBD1-227ENST00000592060 HRH4Q9H3N8 390 aa13.27□□□□□ -0.28
MBD1-227ENST00000592060 DMXL1Q9Y485 3027 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 A0A0G2JRQ6 117 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 TMEM30CPA0ZSE6 113 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 K7EM74 188 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 HEXAP06865 529 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 SEC11BP0C7V7 166 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 SPP1P10451 314 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 FABP6P51161 128 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 HOXA4Q00056 320 aaPredicted RBP13.27□□□□□ -0.29
MBD1-227ENST00000592060 C10orf91Q5T1B1 145 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 C1orf174Q8IYL3 243 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 RPRMLQ8N4K4 120 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 OR51H1Q8NH63 302 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 UBALD1Q8TB05 177 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 PRR7Q8TB68 274 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 AKR1E2Q96JD6 320 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 MSL2Q9HCI7 577 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 WASF3Q9UPY6 502 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 DCHS1Q96JQ0 3298 aa13.27□□□□□ -0.29
MBD1-227ENST00000592060 CHD3Q12873 2000 aaKnown RBP13.26□□□□□ -0.29
MBD1-227ENST00000592060 FAM24AA6NFZ4 105 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 SSSCA1O60232 199 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 PITX3O75364 302 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 ATG12O94817 140 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 PSG2P11465 335 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 MMP9P14780 707 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 GCH1P30793 250 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 CAV2P51636 162 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 ZNF273Q14593 569 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 C1orf185Q5T7R7 199 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 Q6ZRG5 221 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 ODF3L1Q8IXM7 274 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 PRR18Q8N4B5 295 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 LYPD6BQ8NI32 183 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 LYRM2Q9NU23 88 aaPredicted RBP13.26□□□□□ -0.29
MBD1-227ENST00000592060 ZFHX4Q86UP3 3567 aa13.26□□□□□ -0.29
MBD1-227ENST00000592060 LOC105371267A0A1B0GV96 52 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 A6NLC8 198 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 IGKV1-39P01597 117 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 IGKV1D-39P04432 117 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 SLC25A6P12236 298 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 PVALBP20472 110 aaPredicted RBP13.25□□□□□ -0.29
MBD1-227ENST00000592060 DEFA5Q01523 94 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 MSMPQ1L6U9 139 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 EIF2S3LQ2VIR3 472 aaKnown RBP13.25□□□□□ -0.29
MBD1-227ENST00000592060 SLC35E4Q6ICL7 350 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 ZNF474Q6S9Z5 364 aaPredicted RBP13.25□□□□□ -0.29
MBD1-227ENST00000592060 MAGT1Q9H0U3 335 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 KLK10O43240 276 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 TMEM50AO95807 157 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 ARHGDIBP52566 201 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 GPR146Q96CH1 333 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 COQ2Q96H96 371 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 TMEM231Q9H6L2 316 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 PLEKHF2Q9H8W4 249 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 FAM212BQ9NTI7 297 aaPredicted RBP13.25□□□□□ -0.29
MBD1-227ENST00000592060 CARHSP1Q9Y2V2 147 aaKnown RBP13.25□□□□□ -0.29
MBD1-227ENST00000592060 RNF115Q9Y4L5 304 aa13.25□□□□□ -0.29
MBD1-227ENST00000592060 SPENQ96T58 3664 aaKnown RBP13.25□□□□□ -0.29
MBD1-227ENST00000592060 ZNF292O60281 2723 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 PIGBOS1A0A0B4J2F0 54 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 PROB1E7EW31 1015 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 DNASE2O00115 360 aaPredicted RBP13.24□□□□□ -0.29
MBD1-227ENST00000592060 HSPA12AO43301 675 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 PTBP3O95758 552 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms