RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ARHGDIBP52566 201 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 QRFPP83859 136 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 C6orf183Q5T699 404 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 TPTE2P1Q5T6R2 138 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 OR2W3Q7Z3T1 314 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 C6orf201Q7Z4U5 140 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 OR10A7Q8NGE5 316 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 OR4C13Q8NGP0 309 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 TOMM40LQ969M1 308 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 RPEQ96AT9 228 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 CREB3L1Q96BA8 519 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 FAM3DQ96BQ1 224 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 SULT4A1Q9BR01 284 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 URM1Q9BTM9 101 aaKnown RBP11.21□□□□□ -0.61
CLIP3-205ENST00000592017 TM2D1Q9BX74 207 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 LINC00574Q9H8X3 128 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 CHMP1AQ9HD42 196 aaPredicted RBP11.21□□□□□ -0.61
CLIP3-205ENST00000592017 STEAP1Q9UHE8 339 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 STUB1Q9UNE7 303 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 PSG11Q9UQ72 335 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 SIGLEC9Q9Y336 463 aa11.21□□□□□ -0.61
CLIP3-205ENST00000592017 DSCAML1Q8TD84 2053 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 A0A0A6YYD4 124 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 TRAV1-2A0A0B4J238 106 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 A6NDX4 124 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 C15orf65H3BRN8 121 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 SPINT2O43291 252 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 KCNAB3O43448 404 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 ORC5O43913 435 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 CA11O75493 328 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 GLAP06280 429 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 CD37P11049 281 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 RCC1P18754 421 aaPredicted RBP11.2□□□□□ -0.62
CLIP3-205ENST00000592017 RAB3BP20337 219 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 CD24P25063 80 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 PSMD7P51665 324 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 FAM53AQ6NSI3 398 aaPredicted RBP11.2□□□□□ -0.62
CLIP3-205ENST00000592017 CCBE1Q6UXH8 406 aaPredicted RBP11.2□□□□□ -0.62
CLIP3-205ENST00000592017 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 OR10V1Q8NGI7 309 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 OR10X1Q8NGY0 326 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 MRPL30Q8TCC3 161 aaKnown RBP11.2□□□□□ -0.62
CLIP3-205ENST00000592017 FAAP24Q9BTP7 215 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 NPFFR1Q9GZQ6 430 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 LPAR5Q9H1C0 372 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 PLEKHJ1Q9NW61 149 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 GNG12Q9UBI6 72 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 PITPNC1Q9UKF7 332 aa11.2□□□□□ -0.62
CLIP3-205ENST00000592017 SOCS1O15524 211 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 HBZP02008 142 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 GALP22466 123 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 BRS3P32247 399 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 DYNLT3P51808 116 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 C2orf76Q3KRA6 126 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 OR1L1Q8NH94 360 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 SETD6Q8TBK2 473 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 OR51E2Q9H255 320 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 TAF9BQ9HBM6 251 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 RAB9BQ9NP90 201 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 TXNL4BQ9NX01 149 aaKnown RBP11.19□□□□□ -0.62
CLIP3-205ENST00000592017 GFOD1Q9NXC2 390 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 KCNIP1Q9NZI2 227 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 FBLN5Q9UBX5 448 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 SSR3Q9UNL2 185 aa11.19□□□□□ -0.62
CLIP3-205ENST00000592017 A0A0B4J203 849 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 TMEM272A0A1B0GTI8 110 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 IFITM5A6NNB3 132 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 MNDAP41218 407 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 RANBP1P43487 201 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 KIR2DS4P43632 304 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 VEGFCP49767 419 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 PLA2G7Q13093 441 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 MADCAM1Q13477 382 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 CCDC144NLQ6NUI1 221 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 SLC16A12Q6ZSM3 486 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 GAPTQ8N292 157 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 OR52M1Q8NGK5 317 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 CHCHD6Q9BRQ6 235 aa11.18□□□□□ -0.62
CLIP3-205ENST00000592017 LOC100506127A0A0U1RQW1 187 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 LY6LH3BQJ8 138 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 M0QZ24 198 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 SLC31A2O15432 143 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 TNFAIP8O95379 198 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 CD36P16671 472 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 GADD45AP24522 165 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 REG1BP48304 166 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 LOXL3P58215 753 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 DIAPH2-AS1Q14236 149 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 GNMTQ14749 295 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
CLIP3-205ENST00000592017 C5orf24Q7Z6I8 188 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 TSPAN14Q8NG11 270 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 OR56B4Q8NH76 319 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 OR2T6Q8NHC8 308 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 CAPSLQ8WWF8 208 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
CLIP3-205ENST00000592017 RANBP3Q9H6Z4 567 aaPredicted RBP11.17□□□□□ -0.62
CLIP3-205ENST00000592017 LIN7BQ9HAP6 207 aa11.17□□□□□ -0.62
CLIP3-205ENST00000592017 VCX3AQ9NNX9 186 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 304.5 ms