RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 MAGEA13PA6NCF6 341 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 XRCC3O43542 346 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 SYT7O43581 403 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 ENTPD6O75354 484 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 ZNF737O75373 536 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 CLPXO76031 633 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 NXPH2O95156 264 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 C21orf33P30042 268 aaPredicted RBP6.04□□□□□ -1.44
VMP1-213ENST00000591877 HOXD3P31249 432 aaPredicted RBP6.04□□□□□ -1.44
VMP1-213ENST00000591877 SNRPGP62308 76 aaKnown RBP6.04□□□□□ -1.44
VMP1-213ENST00000591877 RPL31P62899 125 aaKnown RBP6.04□□□□□ -1.44
VMP1-213ENST00000591877 IL24Q13007 206 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 SMIM21Q3B7S5 101 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 SLC25A30Q5SVS4 291 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 NCR3LG1Q68D85 454 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 OR4M1Q8NGD0 313 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 OR2G2Q8NGZ5 317 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 OR5R1Q8NH85 324 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 OCC1Q8TAD7 63 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 PIFOQ8TCI5 191 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 TRUB1Q8WWH5 349 aaKnown RBP6.04□□□□□ -1.44
VMP1-213ENST00000591877 ADAT3Q96EY9 351 aaPredicted RBP6.04□□□□□ -1.44
VMP1-213ENST00000591877 MBOAT4Q96T53 435 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 ANKRD60Q9BZ19 345 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 CHST5Q9GZS9 411 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 DPAGT1Q9H3H5 408 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 C16orf95Q9H693 158 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 BATF3Q9NR55 127 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 SMPD3Q9NY59 655 aaPredicted RBP6.04□□□□□ -1.44
VMP1-213ENST00000591877 GNG8Q9UK08 70 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 VPREB3Q9UKI3 123 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 POLDIP2Q9Y2S7 368 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 KCNK7Q9Y2U2 307 aa6.04□□□□□ -1.44
VMP1-213ENST00000591877 CAB39Q9Y376 341 aaPredicted RBP6.04□□□□□ -1.44
VMP1-213ENST00000591877 MEX3AA1L020 520 aaKnown RBP6.03□□□□□ -1.44
VMP1-213ENST00000591877 C5orf52A6NGY3 159 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 C17orf98A8MV24 154 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 H3BUX3 64 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 K7N7A8 449 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 SLC1A7O00341 560 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 SLC33A1O00400 549 aaPredicted RBP6.03□□□□□ -1.44
VMP1-213ENST00000591877 ANGPTL7O43827 346 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 PIPP12273 146 aaPredicted RBP6.03□□□□□ -1.44
VMP1-213ENST00000591877 ATP6V1E1P36543 226 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 NPBWR2P48146 333 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 FUT6P51993 359 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 OR12D2P58182 307 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 CDC42P60953 191 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 TWIST1Q15672 202 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 LDLRAD2Q5SZI1 272 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 PXDC1Q5TGL8 231 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 ASPHD2Q6ICH7 369 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 WDR73Q6P4I2 378 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 GDPGP1Q6ZNW5 385 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 C17orf107Q6ZR85 190 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 SLC25A26Q70HW3 274 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 TCF23Q7RTU1 214 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 LHFPL4Q7Z7J7 247 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 DYNAPQ8N1N2 210 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 DHRSXQ8N5I4 330 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 NHLRC2Q8NBF2 726 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 OR51A4Q8NGJ6 313 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 OR5D13Q8NGL4 314 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 OR10AC1Q8NH08 325 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 DDB2Q92466 427 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 MOB3AQ96BX8 217 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 LGALS12Q96DT0 336 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 CEP19Q96LK0 163 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 ZNF649Q9BS31 505 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 SLC25A33Q9BSK2 321 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.03□□□□□ -1.44
VMP1-213ENST00000591877 SLC7A11Q9UPY5 501 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 EXOGQ9Y2C4 368 aaKnown RBP6.03□□□□□ -1.44
VMP1-213ENST00000591877 TGP01266 2768 aa6.03□□□□□ -1.44
VMP1-213ENST00000591877 KIAA2026Q5HYC2 2103 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 IGKV1-12A0A0C4DH73 117 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 DAPL1A0PJW8 107 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 OR4C45A6NMZ5 311 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 C15orf62A8K5M9 175 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 TNFAIP8O95379 198 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 PAHP00439 452 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 IGKV1D-12P01611 117 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 ISG15P05161 165 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 UBCP0CG48 685 aaKnown RBP6.02□□□□□ -1.45
VMP1-213ENST00000591877 TGFBR2P37173 567 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 CAPGP40121 348 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 LY6EQ16553 131 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 PAPPA-AS1Q5QFB9 102 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 TTC23Q5W5X9 447 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 SLC35E4Q6ICL7 350 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 UTS2BQ765I0 119 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 EGFL6Q8IUX8 553 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 ENTHD1Q8IYW4 607 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 NANOGP1Q8N7R0 232 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 ASCC1Q8N9N2 400 aaKnown RBP6.02□□□□□ -1.45
VMP1-213ENST00000591877 NEXN-AS1Q8NBZ9 246 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 CCDC54Q8NEL0 328 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 OR8H1Q8NGG4 311 aa6.02□□□□□ -1.45
VMP1-213ENST00000591877 PP6455Q8WZ26 134 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms