RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 CCRL2O00421 344 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 HBZP02008 142 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 FAM106CPP0CH98 169 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 SNRPBP14678 240 aaKnown RBP13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 AQP4P55087 323 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 SYT6Q5T7P8 510 aaPredicted RBP13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 THNSL2Q86YJ6 484 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 GAPTQ8N292 157 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 PRR18Q8N4B5 295 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 STX19Q8N4C7 294 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 WFDC9Q8NEX5 89 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 DUX3Q96PT4 197 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 GFI1Q99684 422 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 PLSCR3Q9NRY6 295 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 CHCHD3Q9NX63 227 aaKnown RBP13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 ETAA1Q9NY74 926 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 PEX16Q9Y5Y5 336 aa13.29□□□□□ -0.28
CROCCP3-203ENST00000589964 MYL12BO14950 172 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 CRTAPO75718 401 aaPredicted RBP13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 CDK1P06493 297 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 ZNF816Q0VGE8 651 aaPredicted RBP13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 UNQ9370/PRO34162Q6UXP9 181 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 OR8H3Q8N146 312 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 Q8N9W7 124 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 OR52L2PQ8NGH6 319 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 MRPL30Q8TCC3 161 aaKnown RBP13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 RTN4IP1Q8WWV3 396 aaPredicted RBP13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 CREB3L1Q96BA8 519 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 AKR1E2Q96JD6 320 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 HSPB9Q9BQS6 159 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 TMED9Q9BVK6 235 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 PARP12Q9H0J9 701 aaKnown RBP13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 CKLFQ9UBR5 152 aa13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 TSSC4Q9Y5U2 329 aaPredicted RBP13.28□□□□□ -0.28
CROCCP3-203ENST00000589964 A0A0A6YYD4 124 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 PSMB11A5LHX3 300 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 PTGES3LE9PB15 166 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 PF4V1P10720 104 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 RAB7AP51149 207 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 EBI3Q14213 229 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 IRF3Q14653 427 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 ACSM3Q53FZ2 586 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 C6orf141Q5SZD1 244 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 LINC00596Q86U02 117 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 LINC00311Q8N616 119 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 DTX3Q8N9I9 347 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 OR10A7Q8NGE5 316 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 RITA1Q96K30 269 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 S100A13Q99584 98 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 SULT4A1Q9BR01 284 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 NICN1Q9BSH3 213 aa13.27□□□□□ -0.29
CROCCP3-203ENST00000589964 K7EIL1 84 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 ORC5O43913 435 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 MPIG6BO95866 241 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 VSIG8P0DPA2 414 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 CD33P20138 364 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 GZMHP20718 246 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 HOXD3P31249 432 aaPredicted RBP13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 PPP1CCP36873 323 aaKnown RBP13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 F2RL1P55085 397 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 TAS2R43P59537 309 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 GABPB1Q06547 395 aaPredicted RBP13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 UNC119Q13432 240 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 SLC25A48Q6ZT89 311 aaKnown RBP13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 C8orf86Q6ZUL3 223 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 OR2W3Q7Z3T1 314 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 IZUMO1Q8IYV9 350 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 LINC00482Q8N8I6 264 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 OR52M1Q8NGK5 317 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 C8orf4Q9NR00 106 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 TRAPPC2LQ9UL33 140 aa13.26□□□□□ -0.29
CROCCP3-203ENST00000589964 WI2-2373I1.2A0A1W2PRP0 233 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 MCRIP1C9JLW8 97 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 SC5DO75845 299 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 IGHG2P01859 326 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 CD1AP06126 327 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 CNTFRP26992 372 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 HTR2CP28335 458 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 GPR12P47775 334 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 RPL23AP62750 156 aaKnown RBP13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 QRFPP83859 136 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 NKAPLQ5M9Q1 402 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 SLC16A12Q6ZSM3 486 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 MRPL41Q8IXM3 137 aaKnown RBP13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 ODF3L1Q8IXM7 274 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 OR4X2Q8NGF9 303 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 MRAPQ8TCY5 172 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 TMEM203Q969S6 136 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 HDHD3Q9BSH5 251 aaPredicted RBP13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 TAF9BQ9HBM6 251 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 PCDHB16Q9NRJ7 776 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 NECAP2Q9NVZ3 263 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 GNG12Q9UBI6 72 aa13.25□□□□□ -0.29
CROCCP3-203ENST00000589964 SERPINE3A8MV23 424 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 M0QZK8 103 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 ZNF780AO75290 641 aaPredicted RBP13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 PDCD6O75340 191 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 PF4P02776 101 aa13.24□□□□□ -0.29
CROCCP3-203ENST00000589964 GAPDHP04406 335 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms