RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 FUOMA2VDF0 154 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 SMIM30A4D0T7 59 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 SH2D7A6NKC9 451 aaPredicted RBP4.79□□□□□ -1.64
VPS25-204ENST00000589577 FAM25AB3EWG3 89 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 FAM25CB3EWG5 89 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 FAM25GB3EWG6 89 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 SEC14L6B5MCN3 397 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 SH2D1BO14796 132 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 AKR7A2O43488 359 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 NDUFB3O43676 98 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 AMY1AP04745 511 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 AMY2AP04746 511 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 ZNF44P15621 663 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 MUC1P15941 1255 aaPredicted RBP4.79□□□□□ -1.64
VPS25-204ENST00000589577 PRKACAP17612 351 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 MPZP25189 248 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 OR3A4PP47883 348 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 RAB25P57735 213 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 GMFBP60983 142 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 FAM76BQ5HYJ3 339 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 SPIN3Q5JUX0 258 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 C1orf100Q5SVJ3 147 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 RAB12Q6IQ22 244 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 ZNF529Q6P280 563 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 WDR82Q6UXN9 313 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 LINC00596Q86U02 117 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 LRRTM1Q86UE6 522 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 C11orf53Q8IXP5 236 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 FAM58AQ8N1B3 248 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 OSR2Q8N2R0 312 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 POC1AQ8NBT0 407 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 KLHL30-AS1Q8NEE0 82 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 OR5T2Q8NGG2 359 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 OR56B1Q8NGI3 324 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 OR5D13Q8NGL4 314 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 MCFD2Q8NI22 146 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 NDNFQ8TB73 568 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 C15orf40Q8WUR7 153 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 FAM46BQ96A09 425 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 SLAMF9Q96A28 289 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 S100A16Q96FQ6 103 aaKnown RBP4.79□□□□□ -1.64
VPS25-204ENST00000589577 DCUN1D5Q9BTE7 237 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 NAA50Q9GZZ1 169 aaKnown RBP4.79□□□□□ -1.64
VPS25-204ENST00000589577 OR51I2Q9H344 312 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 LIN7BQ9HAP6 207 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 DIABLOQ9NR28 239 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 IL36GQ9NZH8 169 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 COMMD3Q9UBI1 195 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 PITPNC1Q9UKF7 332 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 RAB22AQ9UL26 194 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 CEPT1Q9Y6K0 416 aa4.79□□□□□ -1.64
VPS25-204ENST00000589577 A0A1W2PQ09 198 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A10PA6NDY2 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A18PA6NE21 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A16PA6NEW6 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A20PA6NIJ5 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A7PA6NKC0 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A22PA8MWA6 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A12PA8MX19 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A5PA8MXJ8 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A23PA8MXZ1 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 ODF3BA8MYP8 253 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 CCL24O00175 119 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 LDLRAD4O15165 306 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 NOS1APO75052 506 aaPredicted RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 OR7C1O76099 320 aaPredicted RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 LY86O95711 162 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 ACAA1P09110 424 aaPredicted RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A15PP0C7V4 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A13PP0C7W8 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A14PP0C7W9 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 FAM90A24PP0C7X0 464 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 PGA5P0DJD9 388 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 MGMTP16455 207 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 RAB6AP20340 208 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 COX7A1P24310 79 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 SLC6A1P30531 599 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 RPS19P39019 145 aaKnown RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 MNDAP41218 407 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 GABRA2P47869 451 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 DYNLT3P51808 116 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 SNU13P55769 128 aaKnown RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 OR10A3P58181 314 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 IL13RA2Q14627 380 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 SPCS2Q15005 226 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 P2RY14Q15391 338 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 SSX2Q16385 188 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 MPV17LQ2QL34 196 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 DEFB136Q30KP8 78 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 LRRC10Q5BKY1 277 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 UBE2NLQ5JXB2 153 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 SPANXN2Q5MJ10 180 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 ATPAF1Q5TC12 328 aaPredicted RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 BAIAP2L2Q6UXY1 529 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 ZNF329Q86UD4 541 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 CALHM1Q8IU99 346 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 SAMD12Q8N8I0 201 aa4.78□□□□□ -1.64
VPS25-204ENST00000589577 ASCC1Q8N9N2 400 aaKnown RBP4.78□□□□□ -1.64
VPS25-204ENST00000589577 CHST4Q8NCG5 386 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms