RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 GFRALQ6UXV0 394 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 ZNF497Q6ZNH5 498 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 TBC1D26Q86UD7 250 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 CXorf67Q86X51 503 aaPredicted RBP8.43□□□□□ -1.06
VPS25-202ENST00000589219 H1FOOQ8IZA3 346 aaPredicted RBP8.43□□□□□ -1.06
VPS25-202ENST00000589219 OR5D13Q8NGL4 314 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 OR11L1Q8NGX0 322 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 KLF14Q8TD94 323 aaPredicted RBP8.43□□□□□ -1.06
VPS25-202ENST00000589219 GLYATL2Q8WU03 294 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 SECTM1Q8WVN6 248 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 RDH5Q92781 318 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 CCDC120Q96HB5 630 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 TLNRD1Q9H1K6 362 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 HES4Q9HCC6 221 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 TMEM100Q9NV29 134 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 UBE2J1Q9Y385 318 aaPredicted RBP8.43□□□□□ -1.06
VPS25-202ENST00000589219 LSM5Q9Y4Y9 91 aaKnown RBP8.43□□□□□ -1.06
VPS25-202ENST00000589219 POMT1Q9Y6A1 747 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 MYO9AB2RTY4 2548 aa8.43□□□□□ -1.06
VPS25-202ENST00000589219 IGHV2OR16-5A0A0B4J2B6 119 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 IGKV1-6A0A0C4DH72 117 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 A0A1B0GWJ7 208 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 TEX46H3BTG2 121 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 SLC33A1O00400 549 aaPredicted RBP8.42□□□□□ -1.06
VPS25-202ENST00000589219 SH2D1BO14796 132 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 ST8SIA3O43173 380 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 TIMM8AO60220 97 aaPredicted RBP8.42□□□□□ -1.06
VPS25-202ENST00000589219 JTBO76095 146 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 ZNF205O95201 554 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 OR2H2O95918 312 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 SCGB1D2O95969 90 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 MBPP02686 304 aaPredicted RBP8.42□□□□□ -1.06
VPS25-202ENST00000589219 HOXD4P09016 255 aaPredicted RBP8.42□□□□□ -1.06
VPS25-202ENST00000589219 ZNF250P15622 560 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 UCP1P25874 307 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 GCH1P30793 250 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 GNRHRP30968 328 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 MPV17P39210 176 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 P2RY1P47900 373 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 TDGF1P3P51864 188 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 CASP6P55212 293 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 HMGN3Q15651 99 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 SP6Q3SY56 376 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 TMEM268Q5VZI3 342 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 MEX3BQ6ZN04 569 aaKnown RBP8.42□□□□□ -1.06
VPS25-202ENST00000589219 ZNF818PQ6ZRF7 136 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 LYZL2Q7Z4W2 148 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 ZNF695Q8IW36 515 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 STPG2Q8N412 459 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 SLC35G3Q8N808 338 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 OR4D5Q8NGN0 318 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 OR10J5Q8NHC4 309 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 ARL11Q969Q4 196 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 STARD4Q96DR4 205 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 SAT2Q96F10 170 aaPredicted RBP8.42□□□□□ -1.06
VPS25-202ENST00000589219 TP53RKQ96S44 253 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 SFXN3Q9BWM7 321 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 TAAR3PQ9P1P4 343 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 FBXL17Q9UF56 701 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 OR2W1Q9Y3N9 320 aa8.42□□□□□ -1.06
VPS25-202ENST00000589219 BORCS7-ASMTA0A0B4J1R7 106 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 IGKV1D-13A0A0B4J2D9 117 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 IGHV1-18A0A0C4DH31 117 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 TMEM30CPA0ZSE6 113 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 SIRPB1O00241 398 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 HS3ST1O14792 307 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 HAND1O96004 215 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 IGKV1-13P0DP09 117 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 MMP9P14780 707 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 PVALBP20472 110 aaPredicted RBP8.41□□□□□ -1.06
VPS25-202ENST00000589219 TIMP3P35625 211 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 FOXF2Q12947 444 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 GNMTQ14749 295 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 KRTCAP3Q53RY4 240 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 TIMM23BQ5SRD1 257 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 SP5Q6BEB4 398 aaPredicted RBP8.41□□□□□ -1.06
VPS25-202ENST00000589219 IL34Q6ZMJ4 242 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 FOXRED2Q8IWF2 684 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 ZNF610Q8N9Z0 462 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 OR10V1Q8NGI7 309 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 LILRB1Q8NHL6 650 aaPredicted RBP8.41□□□□□ -1.06
VPS25-202ENST00000589219 LHFPL5Q8TAF8 219 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 SUN5Q8TC36 379 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 ZDHHC16Q969W1 377 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 AKR1E2Q96JD6 320 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 LINC00052Q96N35 136 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 DMRTA2Q96SC8 542 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 OPN3Q9H1Y3 402 aaPredicted RBP8.41□□□□□ -1.06
VPS25-202ENST00000589219 MBNL3Q9NUK0 354 aaKnown RBP8.41□□□□□ -1.06
VPS25-202ENST00000589219 WIPI2Q9Y4P8 454 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 SLC25A15Q9Y619 301 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 ZNF407Q9C0G0 2248 aa8.41□□□□□ -1.06
VPS25-202ENST00000589219 LRBAP50851 2863 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 TRGV8A0A0C4DH27 118 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 CCL21O00585 134 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 CDIPTO14735 213 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 HSD17B6O14756 317 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 MLNRO43193 412 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 KCNAB3O43448 404 aa8.4□□□□□ -1.06
VPS25-202ENST00000589219 SLC25A6P12236 298 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms