RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 SLC25A48Q6ZT89 311 aaKnown RBP10.92□□□□□ -0.66
VMP1-209ENST00000588915 OR11H1Q8NG94 326 aa10.92□□□□□ -0.66
VMP1-209ENST00000588915 RHOXF1Q8NHV9 184 aa10.92□□□□□ -0.66
VMP1-209ENST00000588915 GPR148Q8TDV2 347 aa10.92□□□□□ -0.66
VMP1-209ENST00000588915 KCTD7Q96MP8 289 aa10.92□□□□□ -0.66
VMP1-209ENST00000588915 S100A13Q99584 98 aa10.92□□□□□ -0.66
VMP1-209ENST00000588915 FAM192AQ9GZU8 254 aa10.92□□□□□ -0.66
VMP1-209ENST00000588915 SPACA1Q9HBV2 294 aa10.92□□□□□ -0.66
VMP1-209ENST00000588915 HUWE1Q7Z6Z7 4374 aaKnown RBP10.92□□□□□ -0.66
VMP1-209ENST00000588915 GEMIN2O14893 280 aaKnown RBP10.91□□□□□ -0.66
VMP1-209ENST00000588915 SPINT2O43291 252 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 CDRT1O95170 752 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 PPIFP30405 207 aaKnown RBP10.91□□□□□ -0.66
VMP1-209ENST00000588915 ZNF93P35789 620 aaPredicted RBP10.91□□□□□ -0.66
VMP1-209ENST00000588915 ALDH3A2P51648 485 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 GPR176Q14439 515 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 RPL22L1Q6P5R6 122 aaKnown RBP10.91□□□□□ -0.66
VMP1-209ENST00000588915 ZNF429Q86V71 674 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 STX19Q8N4C7 294 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 ZNF439Q8NDP4 499 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 TMEM106AQ96A25 262 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 HSPB9Q9BQS6 159 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 TAS2R4Q9NYW5 299 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 ING4Q9UNL4 249 aa10.91□□□□□ -0.66
VMP1-209ENST00000588915 SORL1Q92673 2214 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 ZNF736B4DX44 427 aaPredicted RBP10.9□□□□□ -0.66
VMP1-209ENST00000588915 I3L521 148 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 LANCL1O43813 399 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 CA11O75493 328 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 GTF2F2P13984 249 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 SOX2P48431 317 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 F2RL1P55085 397 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 PPP3R1P63098 170 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 ZNF616Q08AN1 781 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 KIAA0141Q14154 515 aaPredicted RBP10.9□□□□□ -0.66
VMP1-209ENST00000588915 C6orf183Q5T699 404 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 FAM27D1Q5T7N8 215 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 TMEM65Q6PI78 240 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 TRAT1Q6PIZ9 186 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 ZNF491Q8N8L2 437 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 OR1N2Q8NGR9 330 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 MUC7Q8TAX7 377 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 NEK7Q8TDX7 302 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 CCDC107Q8WV48 283 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 MRPS24Q96EL2 167 aaKnown RBP10.9□□□□□ -0.66
VMP1-209ENST00000588915 ASCL2Q99929 193 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 ZNF107Q9UII5 783 aaPredicted RBP10.9□□□□□ -0.66
VMP1-209ENST00000588915 VSIG4Q9Y279 399 aa10.9□□□□□ -0.66
VMP1-209ENST00000588915 RPL36Q9Y3U8 105 aaKnown RBP10.9□□□□□ -0.66
VMP1-209ENST00000588915 DYNC2H1Q8NCM8 4307 aaKnown RBP10.9□□□□□ -0.67
VMP1-209ENST00000588915 DNAH7Q8WXX0 4024 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 IGHV3-43A0A0B4J1X8 118 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 AIPO00170 330 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 EI24O14681 340 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 GPX5O75715 221 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 CIB2O75838 187 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 IGLV1-40P01703 118 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 IGHV3-43DP0DP04 118 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 BDKRB2P30411 391 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 ZNF134P52741 427 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 ZIK1Q3SY52 487 aaPredicted RBP10.89□□□□□ -0.67
VMP1-209ENST00000588915 CT45A1Q5HYN5 189 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 ATAD3CQ5T2N8 411 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 CASC10Q5T4H9 136 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 DDI2Q5TDH0 399 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 GAPTQ8N292 157 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 OR52I1Q8NGK6 324 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 CT45A3Q8NHU0 189 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 RGP1Q92546 391 aaPredicted RBP10.89□□□□□ -0.67
VMP1-209ENST00000588915 ZNF581Q9P0T4 197 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 RCC2Q9P258 522 aaKnown RBP10.89□□□□□ -0.67
VMP1-209ENST00000588915 GNG12Q9UBI6 72 aa10.89□□□□□ -0.67
VMP1-209ENST00000588915 FAM90A10PA6NDY2 464 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 C12orf77C9JDV5 145 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 MCRIP1C9JLW8 97 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 HLA-DRB1P01911 266 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 GLAP06280 429 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 SERPINA2P20848 420 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 GTF2A1P52655 376 aaPredicted RBP10.88□□□□□ -0.67
VMP1-209ENST00000588915 LSAMPQ13449 338 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 SYT6Q5T7P8 510 aaPredicted RBP10.88□□□□□ -0.67
VMP1-209ENST00000588915 ZNF554Q86TJ5 538 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 AMBNQ9NP70 447 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 FGF20Q9NP95 211 aaPredicted RBP10.88□□□□□ -0.67
VMP1-209ENST00000588915 AASSQ9UDR5 926 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 TRAPPC2LQ9UL33 140 aa10.88□□□□□ -0.67
VMP1-209ENST00000588915 SLC31A2O15432 143 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 LIMS3P0CW19 117 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 LIMS4P0CW20 117 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 RAB9AP51151 201 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 MMDQ15546 238 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 SLC22A6Q4U2R8 563 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 ZFP1Q6P2D0 407 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 CDH26Q8IXH8 852 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 UBALD1Q8TB05 177 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 RCHY1Q96PM5 261 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 KLK15Q9H2R5 256 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 OR51J1Q9H342 316 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 GNB4Q9HAV0 340 aa10.87□□□□□ -0.67
VMP1-209ENST00000588915 SACSQ9NZJ4 4579 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms