RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 HACD4Q5VWC8 232 aa15.48■□□□□ 0.07
CLPTM1-209ENST00000588855 TRAT1Q6PIZ9 186 aa15.48■□□□□ 0.07
CLPTM1-209ENST00000588855 MOB1BQ7L9L4 216 aa15.48■□□□□ 0.07
CLPTM1-209ENST00000588855 OR1L1Q8NH94 360 aa15.48■□□□□ 0.07
CLPTM1-209ENST00000588855 NUDCD2Q8WVJ2 157 aa15.48■□□□□ 0.07
CLPTM1-209ENST00000588855 XRCC3O43542 346 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 HBZP02008 142 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 FCGR3AP08637 254 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 UBE2E1P51965 193 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 HMGN3Q15651 99 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 TMEM69Q5SWH9 247 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 OR52W1Q6IF63 320 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 BCL6BQ8N143 479 aaPredicted RBP15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 PIP4P2Q8N4L2 257 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 OR13D1Q8NGV5 346 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 MS4A7Q9GZW8 240 aaPredicted RBP15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 MIXL1Q9H2W2 232 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 Q9N2K0 584 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 KCNIP1Q9NZI2 227 aa15.47■□□□□ 0.07
CLPTM1-209ENST00000588855 IGHV2-26A0A0B4J1V2 119 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 CTDSP2O14595 271 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 NPFFO15130 113 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 SPINT2O43291 252 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 PTHLHP12272 177 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 FPR2P25090 351 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 TAS2R20P59543 309 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 FAM53AQ6NSI3 398 aaPredicted RBP15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 ZNF554Q86TJ5 538 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 OR10A7Q8NGE5 316 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 MAFIPQ8WZ33 124 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 DGCR14Q96DF8 476 aaKnown RBP15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 AUNIPQ9H7T9 357 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 ZNF286AQ9HBT8 521 aa15.46■□□□□ 0.07
CLPTM1-209ENST00000588855 IGHV3-43A0A0B4J1X8 118 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 FAM25AB3EWG3 89 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 FAM25CB3EWG5 89 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 FAM25GB3EWG6 89 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 F2RL2O00254 374 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 RGS5O15539 181 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 IGHV3-43DP0DP04 118 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 GNG2P59768 71 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 HLA-DRB3P79483 266 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 MADCAM1Q13477 382 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 PNLIPRP3Q17RR3 467 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 C9orf139Q6ZV77 190 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 LAX1Q8IWV1 398 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 LEAP2Q969E1 77 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 CLEC7AQ9BXN2 247 aa15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 C6orf62Q9GZU0 229 aaPredicted RBP15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 ZNF230Q9UIE0 474 aaPredicted RBP15.45■□□□□ 0.06
CLPTM1-209ENST00000588855 A0A087X0M5 115 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 A0A1B0GX30 115 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 ODF3BA8MYP8 253 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 SDCBPO00560 298 aaPredicted RBP15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 SSX5O60225 188 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 IGHV3-7P01780 117 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 ARG1P05089 322 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 TALDO1P37837 337 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 LOXL3P58215 753 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 BPIFB3P59826 476 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 ZNF626Q68DY1 528 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 ABHD12Q8N2K0 398 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 OR11H6Q8NGC7 330 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 MCFD2Q8NI22 146 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 GCDHQ92947 438 aaPredicted RBP15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 SLC6A7Q99884 636 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 NXF2Q9GZY0 626 aaKnown RBP15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 RAB9BQ9NP90 201 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 GFOD1Q9NXC2 390 aa15.44■□□□□ 0.06
CLPTM1-209ENST00000588855 POM121CA8CG34 1229 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 MELTFP08582 738 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 CD34P28906 385 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 SAA4P35542 130 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 MNDAP41218 407 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 EXTL2Q9UBQ6 330 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 MGAT4AQ9UM21 535 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 A0A0U1RQK1 487 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 MDFIC2A0A1B0GVS7 189 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 MEIOCA2RUB1 952 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 A6NHS1 94 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 GNG10P50151 68 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 PITPNAQ00169 270 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 SCGB2A2Q13296 93 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 OR10V1Q8NGI7 309 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 OR52M1Q8NGK5 317 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 C17orf50Q8WW18 174 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 IL1F10Q8WWZ1 152 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 GALMQ96C23 342 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 ZNRD1Q9P1U0 126 aa15.43■□□□□ 0.06
CLPTM1-209ENST00000588855 IGKV1D-8A0A087WSZ0 117 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 SCTP09683 121 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 DTYMKP23919 212 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 GNMTQ14749 295 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 MIDNQ504T8 468 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 LDLRAD2Q5SZI1 272 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 LHFPL4Q7Z7J7 247 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 OR52L2PQ8NGH6 319 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 ZNF48Q96MX3 618 aaPredicted RBP15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 OR2S2Q9NQN1 319 aa15.42■□□□□ 0.06
CLPTM1-209ENST00000588855 GNG12Q9UBI6 72 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms