RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 MCHR1Q99705 422 aa5.58□□□□□ -1.52
AP000547.3-204ENST00000588548 QTRT1Q9BXR0 403 aaKnown RBP5.58□□□□□ -1.52
AP000547.3-204ENST00000588548 NKX2-4Q9H2Z4 354 aa5.58□□□□□ -1.52
AP000547.3-204ENST00000588548 ZNF665Q9H7R5 613 aa5.58□□□□□ -1.52
AP000547.3-204ENST00000588548 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
AP000547.3-204ENST00000588548 NEUROD4Q9HD90 331 aa5.58□□□□□ -1.52
AP000547.3-204ENST00000588548 JKAMPQ9P055 326 aa5.58□□□□□ -1.52
AP000547.3-204ENST00000588548 FANCMQ8IYD8 2048 aa5.58□□□□□ -1.52
AP000547.3-204ENST00000588548 C9orf118A6NHY6 69 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 SLC17A3O00476 420 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 XRCC2O43543 280 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 NGFRP08138 427 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 SRFP11831 508 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 NTSR1P30989 418 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 DNASE1L1P49184 302 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 RHOBP62745 196 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 EWSR1Q01844 656 aaKnown RBP eCLIP5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 FOXL1Q12952 345 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 SQSTM1Q13501 440 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 LHFPL1Q86WI0 220 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 ZNF683Q8IZ20 524 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 OR51A4Q8NGJ6 313 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 GLYATL1Q969I3 302 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 TSSK2Q96PF2 358 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 JMJD8Q96S16 334 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 GPER1Q99527 375 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 KXD1Q9BQD3 176 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 PRSS27Q9BQR3 290 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 CLDND1Q9NY35 253 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 HSPB8Q9UJY1 196 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 ANAPC10Q9UM13 185 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 UBE2J1Q9Y385 318 aaPredicted RBP5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 TIMM13Q9Y5L4 95 aaPredicted RBP5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 LAMA3Q16787 3333 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 TRIP12Q14669 1992 aaPredicted RBP5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 TRAV38-1A0A0B4J264 116 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 MYADML2A6NDP7 307 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 CEBPZOSA8MTT3 80 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 B5MCH6 92 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 M0QXV9 152 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 ST8SIA3O43173 380 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 CLEC3AO75596 197 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 ABHD16AO95870 558 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 HBZP02008 142 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 CEACAM5P06731 702 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 ZNF728P0DKX0 622 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 SFTPDP35247 375 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 ZNF133P52736 654 aaPredicted RBP5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 DUSP2Q05923 314 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 ACKR1Q16570 336 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 IER5LQ5T953 404 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 PLCXD3Q63HM9 321 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 TCF23Q7RTU1 214 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 LGI3Q8N145 548 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 OR2K2Q8NGT1 345 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 MBD3L1Q8WWY6 194 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 NINJ1Q92982 152 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 BANF2Q9H503 90 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 NGBQ9NPG2 151 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 PNRC2Q9NPJ4 139 aaKnown RBP5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 C20orf141Q9NUB4 165 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 TAAR3PQ9P1P4 343 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 POLR1DQ9Y2S0 133 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 HCFC2Q9Y5Z7 792 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 DOCK11Q5JSL3 2073 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 KIAA1549Q9HCM3 1950 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 LAMA2P24043 3122 aaKnown RBP5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 SPTBP11277 2137 aa5.57□□□□□ -1.52
AP000547.3-204ENST00000588548 A0A1B0GTH9 108 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 TMEM212A6NML5 194 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 ANKRD66B4E2M5 251 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 PTGESO14684 152 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 SLC31A1O15431 190 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 MLNRO43193 412 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 CA2P00918 260 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 TGFAP01135 160 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 GYPAP02724 150 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 ADH4P08319 380 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 GNG4P50150 75 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 MEF2CQ06413 473 aaPredicted RBP5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 MFGE8Q08431 387 aaPredicted RBP5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 ZNF658BQ4V348 819 aaPredicted RBP5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 GLYATL3Q5SZD4 288 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 ZNF787Q6DD87 383 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 ASTLQ6HA08 431 aaPredicted RBP5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 ZNF676Q8N7Q3 588 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 PFN4Q8NHR9 129 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 ZNRF4Q8WWF5 429 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 EMG1Q92979 244 aaKnown RBP5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 PERPQ96FX8 193 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 PAAF1Q9BRP4 392 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 NDFIP1Q9BT67 221 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 EFCAB11Q9BUY7 163 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 VN1R1Q9GZP7 353 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 PLA2G3Q9NZ20 509 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 LHX3Q9UBR4 397 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 VPREB3Q9UKI3 123 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 A0A1W2PS18 150 aa5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 MBLAC1A4D2B0 266 aaPredicted RBP5.56□□□□□ -1.52
AP000547.3-204ENST00000588548 HELTA6NFD8 242 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms