RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 HPSE2Q8WWQ2 592 aa12.44□□□□□ -0.42
CCDC43-203ENST00000588210 SPSB4Q96A44 273 aa12.44□□□□□ -0.42
CCDC43-203ENST00000588210 TMED3Q9Y3Q3 217 aa12.44□□□□□ -0.42
CCDC43-203ENST00000588210 UTP20O75691 2785 aaKnown RBP12.44□□□□□ -0.42
CCDC43-203ENST00000588210 ZNF98A6NK75 572 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 RAB5CP51148 216 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 C15orf54Q8N8G6 183 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 OR52M1Q8NGK5 317 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 OR4D5Q8NGN0 318 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 FGFBP3Q8TAT2 258 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 FAM222BQ8WU58 562 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 SCRT1Q9BWW7 348 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 GPR35Q9HC97 309 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 CRIM1Q9NZV1 1036 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 STRAPQ9Y3F4 350 aaKnown RBP12.43□□□□□ -0.42
CCDC43-203ENST00000588210 ARID1AO14497 2285 aa12.43□□□□□ -0.42
CCDC43-203ENST00000588210 GLAP06280 429 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 MMP7P09237 267 aaPredicted RBP12.42□□□□□ -0.42
CCDC43-203ENST00000588210 AADACP22760 399 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 LMO1P25800 156 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
CCDC43-203ENST00000588210 SRPXP78539 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 DAZAP2Q15038 168 aaPredicted RBP12.42□□□□□ -0.42
CCDC43-203ENST00000588210 BRICD5Q6PL45 260 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 Q6ZS49 121 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM185AQ8N0U4 392 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 OR11L1Q8NGX0 322 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 SECTM1Q8WVN6 248 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 AKR1E2Q96JD6 320 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 EGLN1Q9GZT9 426 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 ESRP2Q9H6T0 727 aaKnown RBP12.42□□□□□ -0.42
CCDC43-203ENST00000588210 RCL1Q9Y2P8 373 aaKnown RBP12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A10PA6NDY2 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A18PA6NE21 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A16PA6NEW6 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A20PA6NIJ5 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A8PA6NJQ4 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A7PA6NKC0 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A22PA8MWA6 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A12PA8MX19 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A5PA8MXJ8 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A23PA8MXZ1 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 PHF1O43189 567 aaPredicted RBP12.42□□□□□ -0.42
CCDC43-203ENST00000588210 LYZL6O75951 148 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A15PP0C7V4 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A13PP0C7W8 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A14PP0C7W9 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FAM90A24PP0C7X0 464 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 FUT3P21217 361 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 PPT1P50897 306 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 TGFBR3Q03167 851 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 NRN1LQ496H8 165 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 ZNF787Q6DD87 383 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 CLEC9AQ6UXN8 241 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 BHLHA15Q7RTS1 189 aaPredicted RBP12.42□□□□□ -0.42
CCDC43-203ENST00000588210 Q8NFD4 153 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 PIGCQ92535 297 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 C1QTNF5Q9BXJ0 243 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 ATPIF1Q9UII2 106 aa12.42□□□□□ -0.42
CCDC43-203ENST00000588210 RPL36A-HNRNPH2H7BZ11 118 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 CDS2O95674 445 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 PPYP01298 95 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 IFNA4P05014 189 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 CAMLGP49069 296 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 AKR1D1P51857 326 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 GUK1Q16774 197 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 CALHM1Q8IU99 346 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 SLC35G3Q8N808 338 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 ZNF611Q8N823 705 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 S100PBPQ96BU1 408 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 C11orf1Q9H5F2 150 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 ZNF442Q9H7R0 627 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 C19orf12Q9NSK7 152 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 FOXG1P55316 489 aaPredicted RBP12.41□□□□□ -0.42
CCDC43-203ENST00000588210 ZNF616Q08AN1 781 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 TSC22D1Q15714 1073 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 SRSF7Q16629 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC43-203ENST00000588210 C1orf162Q8NEQ5 155 aaPredicted RBP12.41□□□□□ -0.42
CCDC43-203ENST00000588210 C14orf79Q96F83 325 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 BOD1Q96IK1 185 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 TP53RKQ96S44 253 aa12.41□□□□□ -0.42
CCDC43-203ENST00000588210 PARP12Q9H0J9 701 aaKnown RBP12.41□□□□□ -0.42
CCDC43-203ENST00000588210 NBPF19A0A087WUL8 3843 aa12.4□□□□□ -0.42
CCDC43-203ENST00000588210 GABRA6Q16445 453 aa12.4□□□□□ -0.42
CCDC43-203ENST00000588210 COLCA1Q6ZS62 124 aa12.4□□□□□ -0.42
CCDC43-203ENST00000588210 C22orf34Q6ZV56 151 aa12.4□□□□□ -0.42
CCDC43-203ENST00000588210 SSX8Q7RTT4 187 aa12.4□□□□□ -0.42
CCDC43-203ENST00000588210 PKDREJQ9NTG1 2253 aa12.4□□□□□ -0.42
CCDC43-203ENST00000588210 ASH1LQ9NR48 2969 aaKnown RBP12.4□□□□□ -0.43
CCDC43-203ENST00000588210 HECTD1Q9ULT8 2610 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 C3orf85A0A1B0GTC6 90 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 TRDCB7Z8K6 153 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 MPPED1O15442 326 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 OR7C1O76099 320 aaPredicted RBP12.39□□□□□ -0.43
CCDC43-203ENST00000588210 GOSR1O95249 250 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 KCNJ3P48549 501 aa12.39□□□□□ -0.43
CCDC43-203ENST00000588210 RAB5BP61020 215 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms