RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ARHGDIBP52566 201 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 DLX6P56179 175 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 KIR2DS1Q14954 304 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 MOGAT2Q3SYC2 334 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 MIDNQ504T8 468 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 PLAC9Q5JTB6 97 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 RUSC1-AS1Q66K80 236 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 ZNF554Q86TJ5 538 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 RTN4RL2Q86UN3 420 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 ABHD12Q8N2K0 398 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 OR10A7Q8NGE5 316 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 ZNF596Q8TC21 504 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 MRPL30Q8TCC3 161 aaKnown RBP11.34□□□□□ -0.59
TRAF4-215ENST00000584944 CREB3L1Q96BA8 519 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 JMJD8Q96S16 334 aa11.34□□□□□ -0.59
TRAF4-215ENST00000584944 MRPS7Q9Y2R9 242 aaKnown RBP11.34□□□□□ -0.59
TRAF4-215ENST00000584944 IGHV2-26A0A0B4J1V2 119 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 FAM172BPA6NC97 362 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 BTBD17A6NE02 478 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 C12orf77C9JDV5 145 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 RNASEK-C17orf49H0YIS7 233 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 HPGDSO60760 199 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 HBZP02008 142 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 FBP1P09467 338 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 CEACAM3P40198 252 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 DLX1P56177 255 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 TMEM50BP56557 158 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 PNLIPRP3Q17RR3 467 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 KLF17Q5JT82 389 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-215ENST00000584944 HACD4Q5VWC8 232 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 TCF23Q7RTU1 214 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 IZUMO1Q8IYV9 350 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 OR10X1Q8NGY0 326 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 UBALD1Q8TB05 177 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 DGCR14Q96DF8 476 aaKnown RBP11.33□□□□□ -0.6
TRAF4-215ENST00000584944 SLC25A38Q96DW6 304 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 CMTM3Q96MX0 182 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 SLC6A7Q99884 636 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 DCUN1D5Q9BTE7 237 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 ABCG5Q9H222 651 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 OR2S2Q9NQN1 319 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
TRAF4-215ENST00000584944 AMMECR1Q9Y4X0 333 aaPredicted RBP11.33□□□□□ -0.6
TRAF4-215ENST00000584944 TMEM235A6NFC5 223 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 MFNGO00587 321 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 XRCC3O43542 346 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 NAPSAO96009 420 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 S100A5P33763 92 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 SAA4P35542 130 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 GNG10P50151 68 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 C17orf58Q2M2W7 97 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 MCFD2Q8NI22 146 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 C15orf40Q8WUR7 153 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 KIRREL1Q96J84 757 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 HDHD3Q9BSH5 251 aaPredicted RBP11.32□□□□□ -0.6
TRAF4-215ENST00000584944 ST6GALNAC5Q9BVH7 336 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 C19orf24Q9BVV8 132 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 ZNF286AQ9HBT8 521 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 IFT46Q9NQC8 304 aa11.32□□□□□ -0.6
TRAF4-215ENST00000584944 FOXI3A8MTJ6 420 aaPredicted RBP11.31□□□□□ -0.6
TRAF4-215ENST00000584944 TRDCB7Z8K6 153 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 TCF21O43680 179 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 FSHBP01225 129 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 ZBTB25P24278 435 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 IL3RAP26951 378 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 HTR1DP28221 377 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 SRSF2Q01130 221 aaKnown RBP11.31□□□□□ -0.6
TRAF4-215ENST00000584944 STEAP3Q658P3 488 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 OLFML2AQ68BL7 652 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 GAPTQ8N292 157 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 DTX3Q8N9I9 347 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 OR11H6Q8NGC7 330 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 OR9G1Q8NH87 305 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 OR1L1Q8NH94 360 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 DYNC2LI1Q8TCX1 351 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 GINS4Q9BRT9 223 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 ABCB10Q9NRK6 738 aa11.31□□□□□ -0.6
TRAF4-215ENST00000584944 MBNL3Q9NUK0 354 aaKnown RBP11.31□□□□□ -0.6
TRAF4-215ENST00000584944 TRBV6-6A0A0A6YYG2 114 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 IGHV3-43A0A0B4J1X8 118 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 A0A0U1RQK1 487 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 NPIPB11E5RHQ5 1161 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 MMP23AO75900 390 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 EIF4EP06730 217 aaKnown RBP11.3□□□□□ -0.6
TRAF4-215ENST00000584944 LPLP06858 475 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 FCGR3AP08637 254 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 IGHV3-43DP0DP04 118 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 ELK1P19419 428 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 DTYMKP23919 212 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 PRSS3P35030 304 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 CBX5P45973 191 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 ARPC4P59998 168 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 BAMBIQ13145 260 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 C11orf42Q8N5U0 333 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 SIGLECL1Q8N7X8 197 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 OR10V1Q8NGI7 309 aa11.3□□□□□ -0.6
TRAF4-215ENST00000584944 NUDCD2Q8WVJ2 157 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms