RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 UCK2Q9BZX2 261 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 CCDC90BQ9GZT6 254 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 RETNQ9HD89 108 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF71Q9NQZ8 489 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 EHFQ9NZC4 300 aa1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 NUFIP1Q9UHK0 495 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF223Q9UK11 482 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-211ENST00000584897 IGLV4-3A0A075B6K6 122 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TRAV6A0A075B6T7 132 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A0A6YYH2 397 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A0B4J2A0 478 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF860A6NHJ4 632 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 A6NJ64 397 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 UBFD1O14562 309 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GNGT2O14610 69 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 PDCD5O14737 125 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SPAG7O75391 227 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 FOXH1O75593 365 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CRTAPO75718 401 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC22A5O76082 557 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GADD45GO95257 159 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TGM4P49221 684 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GDI2P50395 445 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GABARAPL2P60520 117 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 HIST1H3AP68431 136 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 PAX5Q02548 391 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF85Q03923 595 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR1Q1Q15612 314 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 MRPL2Q5T653 305 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TPTE2P1Q5T6R2 138 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 HIST2H3PS2Q5TEC6 136 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM244Q5VVB8 128 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GLYATQ6IB77 296 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2T5Q6IEZ7 315 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 NANOGP8Q6NSW7 305 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CASP12Q6UXS9 341 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 BAIAP2L2Q6UXY1 529 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TMPRSS11AQ6ZMR5 421 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF836Q6ZNA1 936 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 NCCRP1Q6ZVX7 275 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 HIST2H3AQ71DI3 136 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GALNT10Q86SR1 603 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GTSCR1Q86UQ5 136 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CHST4Q8NCG5 386 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR9G4Q8NGQ1 327 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2T29Q8NH02 315 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR10D3Q8NH80 312 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SGMS2Q8NHU3 365 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 PP6455Q8WZ26 134 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 PYGO2Q9BRQ0 406 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM246Q9BRR3 403 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 MRPL37Q9BZE1 423 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 RNF167Q9H6Y7 350 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 RANBP3Q9H6Z4 567 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 NANOGQ9H9S0 305 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SCRT2Q9NQ03 307 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ABCB10Q9NRK6 738 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SCN3BQ9NY72 215 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CCDC59Q9P031 241 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CACNG5Q9UF02 275 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SHPKQ9UHJ6 478 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 RIMS3Q9UJD0 308 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF225Q9UK10 706 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 PRELID3BQ9Y3B1 194 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 PCYT1BQ9Y5K3 369 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 APCP25054 2843 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TCRBV3S1A0A5B6 114 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SEC14L6B5MCN3 397 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 KPNA4O00629 521 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 MPDU1O75352 247 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 FCN3O75636 299 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GPX5O75715 221 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TOXO94900 526 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SLC2A10O95528 541 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SEMG1P04279 462 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ASAH2BP0C7U1 165 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR12D1P0DN82 309 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 IGFBP5P24593 272 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 MDH2P40926 338 aaKnown RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 VDAC2P45880 294 aaPredicted RBP1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 SLCO1A2P46721 670 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GZMMP51124 257 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 EFNA4P52798 201 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 BTG2P78543 158 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF117Q03924 483 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ASAH1Q13510 395 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF266Q14584 549 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 GSG1Q2KHT4 349 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TTMPQ5BVD1 217 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 LRRN1Q6UXK5 716 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 C2orf66Q6UXQ4 117 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 NPSR1Q6W5P4 371 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 CARM1Q86X55 608 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 TPRX1Q8N7U7 411 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 C8orf31Q8N9H6 132 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR10G3Q8NGC4 313 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR6N1Q8NGY5 312 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 OR9G1Q8NH87 305 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 RDH5Q92781 318 aa1.53□□□□□ -2.16
SMCHD1-211ENST00000584897 MYDGFQ969H8 173 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms