RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	MBNL3	Q9NUK0	354 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	GFOD1	Q9NXC2	390 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ZNF581	Q9P0T4	197 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TRAPPC2L	Q9UL33	140 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708		A0A1W2PPI3	338 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ERICH4	A6NGS2	130 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SLC22A1	O15245	554 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	FGF16	O43320	207 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	PSMD7	P51665	324 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ZNF137P	P52743	207 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	GP2	P55259	537 aa	Known RBP	10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	EBI3	Q14213	229 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	LY6G6F	Q5SQ64	297 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SYT6	Q5T7P8	510 aa	Predicted RBP	10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR4F17	Q8NGA8	305 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR6M1	Q8NGM8	313 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR4F4	Q96R69	305 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	BANF2	Q9H503	90 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	RAB26	Q9ULW5	256 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	MOB4	Q9Y3A3	225 aa		10.05	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	C12orf77	C9JDV5	145 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	HSD17B6	O14756	317 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	MRPS14	O60783	128 aa	Known RBP	10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	AMY1A	P04745	511 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	AMY2A	P04746	511 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CPE	P16870	476 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	HTR2C	P28335	458 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	GNG10	P50151	68 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	RPS27A	P62979	156 aa	Known RBP	10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TBCE	Q15813	527 aa	Predicted RBP	10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ABCA11P	Q4W5N1	156 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	LIPK	Q5VXJ0	399 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	IZUMO2	Q6UXV1	221 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	IZUMO1	Q8IYV9	350 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR8H1	Q8NGG4	311 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	LEAP2	Q969E1	77 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	NEDD4L	Q96PU5	975 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TM2D1	Q9BX74	207 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	RIMS4	Q9H426	269 aa	Predicted RBP	10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ACOT13	Q9NPJ3	140 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	KCNIP1	Q9NZI2	227 aa		10.04	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TRAV39	A0A0B4J263	110 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	IGHV1-3	A0A0C4DH29	117 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	MPIG6B	O95866	241 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	HBZ	P02008	142 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SNRNP70	P08621	437 aa	Known RBP	10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	VSIG8	P0DPA2	414 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CD24	P25063	80 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CD1B	P29016	333 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	HTD2	P86397	168 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CD83	Q01151	205 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	DEFA6	Q01524	100 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	LTC4S	Q16873	150 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	UTF1	Q5T230	341 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	FAM27D1	Q5T7N8	215 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SIGIRR	Q6IA17	410 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708		Q6ZS46	218 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SLC25A48	Q6ZT89	311 aa	Known RBP	10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR2W3	Q7Z3T1	314 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	DRAM1	Q8N682	238 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR5AU1	Q8NGC0	362 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR56B4	Q8NH76	319 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CCDC107	Q8WV48	283 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ST6GALNAC6	Q969X2	333 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	MGLL	Q99685	303 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TMEM59	Q9BXS4	323 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CCDC90B	Q9GZT6	254 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	GNG12	Q9UBI6	72 aa		10.03	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TMEM14DP	A8MWL7	114 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	SLC17A2	O00624	439 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	WIPF1	O43516	503 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	RGS11	O94810	467 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	IGHV3-7	P01780	117 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	HSMCR30	P0CW71	290 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	CD28	P10747	220 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	TMEM11	P17152	192 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	GAL	P22466	123 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	CHAT	P28329	748 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	QRFP	P83859	136 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	HES1	Q14469	280 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	INSL4	Q14641	139 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	TMEM91	Q6ZNR0	172 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	ZNF367	Q7RTV3	350 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	C11orf44	Q8N8P7	122 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	ZNF439	Q8NDP4	499 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	OR4X2	Q8NGF9	303 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	OR2T10	Q8NGZ9	312 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	OR4K15	Q8NH41	348 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	SGCD	Q92629	289 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	FAM46B	Q96A09	425 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	URM1	Q9BTM9	101 aa	Known RBP	10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	TAF9B	Q9HBM6	251 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	JPT1	Q9UK76	154 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	MGAT4A	Q9UM21	535 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	TG	P01266	2768 aa		10.02	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	LANCL1	O43813	399 aa		10.01	□□□□□ -0.81
CDK5RAP3-222	ENST00000581708	ARSB	P15848	533 aa		10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms