RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 A0A1W2PPC1 479 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 TNFSF14O43557 240 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 WNT5AP41221 380 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 RBM11P57052 281 aaKnown RBP12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 FAM60AQ9NP50 221 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 IL19Q9UHD0 177 aa12.71□□□□□ -0.38
CSNK1D-217ENST00000581241 CD40P25942 277 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 CEBPDP49716 269 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 PUSL1Q8N0Z8 303 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 OR4B1Q8NGF8 309 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 AURKAIP1Q9NWT8 199 aaPredicted RBP12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 A0A1W2PPV9 198 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 SIAH2O43255 324 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 CD74P04233 296 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 NANOS3P60323 173 aaKnown RBP12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 FBLIM1Q8WUP2 373 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 ZNF665Q9H7R5 613 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 ERVH48-1M5A8F1 160 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 RHBDD2Q6NTF9 364 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 PAXXQ9BUH6 204 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 TMEM140Q9NV12 185 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 LNP1A1A4G5 178 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 SYNGR1O43759 233 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 CA11O75493 328 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 NMUP48645 174 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 TUSC5Q8IXB3 177 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 OR8B3Q8NGG8 313 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 RHOVQ96L33 236 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 PGLYRP3Q96LB9 341 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 OR8B2Q96RD0 313 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 HIGD1AQ9Y241 93 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 AMY1AP04745 511 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 DRD3P35462 400 aa12.7□□□□□ -0.38
CSNK1D-217ENST00000581241 LOC389332A0A1B0GUA5 103 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 CDIPTO14735 213 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 TMPRSS2O15393 492 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 LHX8Q68G74 356 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 DGAT2L7PQ6IED9 249 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 ZPLD1Q8TCW7 415 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 PTPMT1Q8WUK0 201 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 TGIF2-C20orf24A0A0A6YYL0 155 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 H0Y980 276 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 CD160O95971 181 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 PNLIPP16233 465 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 CD1BP29016 333 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 MOGAT3Q86VF5 341 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 SGMS2Q8NHU3 365 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 MT-ND6P03923 174 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 MMP16P51512 607 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 ZAR1Q86SH2 424 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 SLC25A40Q8TBP6 338 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 RASL10BQ96S79 203 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 HRKO00198 91 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 ZP4Q12836 540 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 ZNF841Q6ZN19 808 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 RFLNBQ8N5W9 214 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 NRTNQ99748 197 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 SLC25A33Q9BSK2 321 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 RNF7Q9UBF6 113 aa12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
CSNK1D-217ENST00000581241 WISP3O95389 354 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 NXPH1P58417 271 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 TWIST1Q15672 202 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 COL25A1Q9BXS0 654 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 RAB1BQ9H0U4 201 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 GOLGA4Q13439 2230 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 IGHV1OR15-9A0A0B4J2B8 117 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 HINT1P49773 126 aaPredicted RBP12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 HYAL1Q12794 435 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 SPINK14Q6IE38 97 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 LILRA6Q6PI73 481 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 LINC00518Q8N0U6 118 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 CT55Q8WUE5 264 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 DSPPQ9NZW4 1301 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 TMEM265A0A087WTH1 108 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 TRBV5-5A0A0J9YX44 114 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 GAGE10A6NGK3 116 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 MGAT2Q10469 447 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 PMCHL1Q16048 86 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 FAM117AQ9C073 453 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 EIF3GO75821 320 aaKnown RBP eCLIP12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 OR1L8Q8NGR8 309 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 P2RX4Q99571 388 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 GPR61Q9BZJ8 451 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 SPINK2P20155 84 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 FCARP24071 287 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 IFITM2Q01629 132 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 RAB37Q96AX2 223 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 HARBI1Q96MB7 349 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 PXMP4Q9Y6I8 212 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 PAPPAQ13219 1627 aa12.68□□□□□ -0.38
CSNK1D-217ENST00000581241 HPRT1P00492 218 aa12.67□□□□□ -0.38
CSNK1D-217ENST00000581241 DNLZQ5SXM8 178 aa12.67□□□□□ -0.38
CSNK1D-217ENST00000581241 IL36RNQ9UBH0 155 aa12.67□□□□□ -0.38
CSNK1D-217ENST00000581241 TMEM238LA0A1B0GVL6 79 aa12.67□□□□□ -0.38
CSNK1D-217ENST00000581241 A6NJY4 79 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms