RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 HLA-DQB1P01920 261 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 HBZP02008 142 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 PTHLHP12272 177 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 DTYMKP23919 212 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 FPR2P25090 351 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 CD34P28906 385 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 LOXL3P58215 753 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 GUCA2AQ02747 115 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 TMEM69Q5SWH9 247 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 RUSC1-AS1Q66K80 236 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 OR52W1Q6IF63 320 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 C9orf139Q6ZV77 190 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 LAX1Q8IWV1 398 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 PDZD9Q8IXQ8 264 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 PNKDQ8N490 385 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 OR11H6Q8NGC7 330 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 MCFD2Q8NI22 146 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 NUDCD2Q8WVJ2 157 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 SUCNR1Q9BXA5 334 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 KCNIP1Q9NZI2 227 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 ZNF69Q9UC07 566 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 A3GALT2U3KPV4 340 aa12.31□□□□□ -0.44
MKS1-210ENST00000581180 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 FAM25AB3EWG3 89 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 FAM25CB3EWG5 89 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 FAM25GB3EWG6 89 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 SPINT2O43291 252 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 SRD5A1P18405 259 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 COX7A1P24310 79 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 MNDAP41218 407 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 BPIFB3P59826 476 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 HLA-DRB3P79483 266 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 MRPS15P82914 257 aaKnown RBP12.3□□□□□ -0.44
MKS1-210ENST00000581180 PITPNAQ00169 270 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 SRSF7Q16629 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
MKS1-210ENST00000581180 ZNF626Q68DY1 528 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 BRD3OSQ6XYD6 125 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 Q6ZS49 121 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 OR52M1Q8NGK5 317 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 OR13D1Q8NGV5 346 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 SETD6Q8TBK2 473 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 C6orf62Q9GZU0 229 aaPredicted RBP12.3□□□□□ -0.44
MKS1-210ENST00000581180 MMP27Q9H306 513 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 ZNF286AQ9HBT8 521 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 RAB9BQ9NP90 201 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 GFOD1Q9NXC2 390 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 ZNF230Q9UIE0 474 aaPredicted RBP12.3□□□□□ -0.44
MKS1-210ENST00000581180 MGAT4AQ9UM21 535 aa12.3□□□□□ -0.44
MKS1-210ENST00000581180 IGHV2-26A0A0B4J1V2 119 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 NPFFO15130 113 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 RGS5O15539 181 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 FAM157CP0CG43 387 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 EPHA1P21709 976 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 NFYBP25208 207 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 GNG2P59768 71 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 HTD2P86397 168 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 LTC4SQ16873 150 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 TMEM30BQ3MIR4 351 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 FAM53AQ6NSI3 398 aaPredicted RBP12.29□□□□□ -0.44
MKS1-210ENST00000581180 BCL6BQ8N143 479 aaPredicted RBP12.29□□□□□ -0.44
MKS1-210ENST00000581180 AJUBAQ96IF1 538 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 BATF3Q9NR55 127 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 EXTL2Q9UBQ6 330 aa12.29□□□□□ -0.44
MKS1-210ENST00000581180 SOX21Q9Y651 276 aaPredicted RBP12.29□□□□□ -0.44
MKS1-210ENST00000581180 NIPBLQ6KC79 2804 aaeCLIP12.28□□□□□ -0.44
MKS1-210ENST00000581180 IGKV1D-8A0A087WSZ0 117 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 A0A1W2PRD5 423 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 A0A1W2PRF3 423 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 A0A1W2PRM7 423 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 FAM172BPA6NC97 362 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 TRDCB7Z8K6 153 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 TPPPO94811 219 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 SCTP09683 121 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 TALDO1P37837 337 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 CNIH2Q6PI25 160 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 ABHD12Q8N2K0 398 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 PRR18Q8N4B5 295 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 MAFIPQ8WZ33 124 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 GCDHQ92947 438 aaPredicted RBP12.28□□□□□ -0.44
MKS1-210ENST00000581180 OCSTAMPQ9BR26 566 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 CLEC7AQ9BXN2 247 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 MS4A7Q9GZW8 240 aaPredicted RBP12.28□□□□□ -0.44
MKS1-210ENST00000581180 ADAM30Q9UKF2 790 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 SETD2Q9BYW2 2564 aaPredicted RBP12.28□□□□□ -0.44
MKS1-210ENST00000581180 JMJD1CQ15652 2540 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 CUBNO60494 3623 aa12.28□□□□□ -0.44
MKS1-210ENST00000581180 IGHV3-43A0A0B4J1X8 118 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 IGKV1-6A0A0C4DH72 117 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 MEIOCA2RUB1 952 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 SDCBPO00560 298 aaPredicted RBP12.27□□□□□ -0.45
MKS1-210ENST00000581180 IGLV1-47P01700 117 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 IGHV3-43DP0DP04 118 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 TNFSF8P32971 234 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 KIR2DS4P43632 304 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 MADCAM1Q13477 382 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 KIR2DS1Q14954 304 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 Q3ZCU0 254 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 MIDNQ504T8 468 aa12.27□□□□□ -0.45
MKS1-210ENST00000581180 LDLRAD2Q5SZI1 272 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms