RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 RFESDQ8TAC1 157 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 SMIM4Q8WVI0 70 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 S100ZQ8WXG8 99 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 FAHD2AQ96GK7 314 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 TMPRSS13Q9BYE2 586 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 SRRQ9GZT4 340 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 ZNF286AQ9HBT8 521 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 RAB9BQ9NP90 201 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 IFT46Q9NQC8 304 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 IDI2-AS1Q9NZ38 188 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 ACANP16112 2415 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 SVEP1Q4LDE5 3571 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 F2RL2O00254 374 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 FABP7O15540 132 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 SPINT2O43291 252 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 RBBP9O75884 186 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 TOX4O94842 621 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 FCER2P06734 321 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 GSTT2P0CG29 244 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 GSTT2BP0CG30 244 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 IGHV1-8P0DP01 117 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 NAT1P18440 290 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 GDNFP39905 211 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 PYDC2Q56P42 97 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 PRAMEF5Q5TYX0 476 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 BEST4Q8NFU0 473 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 OR10A7Q8NGE5 316 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 OR1L1Q8NH94 360 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 SNAPC3Q92966 411 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 GALMQ96C23 342 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 KIRREL1Q96J84 757 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 TBX15Q96SF7 602 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 C7orf69Q9H7B7 122 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 METTL8Q9H825 291 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 UNKLQ9H9P5 680 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 KLK11Q9UBX7 282 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 MTFP1Q9UDX5 166 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 ANXA10Q9UJ72 324 aa13.03□□□□□ -0.32
CSNK1D-212ENST00000580061 PRTN3P24158 256 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 FPR2P25090 351 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 RCVRNP35243 200 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 DLX1P56177 255 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 HTD2P86397 168 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 LSAMPQ13449 338 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 LTC4SQ16873 150 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 OR52W1Q6IF63 320 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 VMO1Q7Z5L0 202 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 OR4A4PQ8NGN8 299 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 SMR3AQ99954 134 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 PCGF1Q9BSM1 259 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 SIRT7Q9NRC8 400 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 KCNS2Q9ULS6 477 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 RBMX2Q9Y388 322 aaKnown RBP13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 AUP1Q9Y679 476 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 SESN1Q9Y6P5 492 aa13.02□□□□□ -0.33
CSNK1D-212ENST00000580061 HIVEP1P15822 2718 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 IGKV1-6A0A0C4DH72 117 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 SDCBPO00560 298 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 AVPP01185 164 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 LOXL3P58215 753 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 ACTBP60709 375 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 ACTG1P63261 375 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 SSBP1Q04837 148 aaKnown RBP13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 HERPUD1Q15011 391 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 TMEM30BQ3MIR4 351 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 ZNF782Q6ZMW2 699 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 LYSMD2Q8IV50 215 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 Q8N402 240 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 GDPD1Q8N9F7 314 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 OR52M1Q8NGK5 317 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 IL1F10Q8WWZ1 152 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 TNFRSF14Q92956 283 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 UPRTQ96BW1 309 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 SDHCQ99643 169 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 THAP7Q9BT49 309 aaPredicted RBP13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 CABLES2Q9BTV7 478 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 TMEM133Q9H2Q1 129 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 GFOD1Q9NXC2 390 aa13.01□□□□□ -0.33
CSNK1D-212ENST00000580061 CSPG4Q6UVK1 2322 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 A0A087X0M5 115 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 IGHV3-43A0A0B4J1X8 118 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 A0A1B0GX30 115 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 LANCL1O43813 399 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 LY6G6DO95868 133 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 IGHV3-43DP0DP04 118 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 NFYBP25208 207 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 PRB3Q04118 309 aaPredicted RBP13□□□□□ -0.33
CSNK1D-212ENST00000580061 ZNF846Q147U1 533 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 IGSF11Q5DX21 431 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 STEAP3Q658P3 488 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 FAM53AQ6NSI3 398 aaPredicted RBP13□□□□□ -0.33
CSNK1D-212ENST00000580061 C1orf229Q6ZS94 237 aaPredicted RBP13□□□□□ -0.33
CSNK1D-212ENST00000580061 OR52L2PQ8NGH6 319 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 TRIM63Q969Q1 353 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 WDR12Q9GZL7 423 aaKnown RBP13□□□□□ -0.33
CSNK1D-212ENST00000580061 JPT1Q9UK76 154 aa13□□□□□ -0.33
CSNK1D-212ENST00000580061 ANK3Q12955 4377 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-212ENST00000580061 RNASEK-C17orf49H0YIS7 233 aa12.99□□□□□ -0.33
CSNK1D-212ENST00000580061 DIRAS3O95661 229 aa12.99□□□□□ -0.33
CSNK1D-212ENST00000580061 CTXN2P0C2S0 81 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms