RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 NDUFB6O95139 128 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 RCC1P18754 421 aaPredicted RBP11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 ZBTB25P24278 435 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 HERV-K104P61576 105 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 RPL31P62899 125 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 CR1LQ2VPA4 569 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 KRTAP21-3Q3LHN1 58 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 CD276Q5ZPR3 534 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 C11orf88Q6PI97 169 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 DHRS11Q6UWP2 260 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 GIMAP1Q8WWP7 306 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 CORO2AQ92828 525 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 ARL11Q969Q4 196 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 SLC6A7Q99884 636 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 PATZ1Q9HBE1 687 aaKnown RBP11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 CLN8Q9UBY8 286 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 LINC00312Q9Y6C7 94 aa11.55□□□□□ -0.56
CSNK1D-209ENST00000578904 IGHV4-61A0A0C4DH41 118 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 hCG_1809904A0A1W2PP81 198 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 A0A1W2PPE2 198 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 A0A1W2PR64 198 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 A0A1W2PRV1 198 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 FAM172BPA6NC97 362 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 BET1O15155 118 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 RGS11O94810 467 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 TFF1P04155 84 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 SCTP09683 121 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 H2AFB2P0C5Z0 115 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 USF1P22415 310 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 S100GP29377 79 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 CCR6P51684 374 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 GNB2P62879 340 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 HTD2P86397 168 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 SURF2Q15527 256 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 ESCO2Q56NI9 601 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 FAAP20Q6NZ36 180 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 LYPD2Q6UXB3 125 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 PRR18Q8N4B5 295 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 ZDHHC22Q8N966 263 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 OR10A7Q8NGE5 316 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 OR4D10Q8NGI6 311 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 CLDND2Q8NHS1 167 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 ZFAND1Q8TCF1 268 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 MRGPRDQ8TDS7 321 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 FAM216AQ8WUB2 273 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 IL1F10Q8WWZ1 152 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 KIRREL1Q96J84 757 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 ZNF2Q9BSG1 426 aaPredicted RBP11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 CABLES2Q9BTV7 478 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 REG4Q9BYZ8 158 aa11.54□□□□□ -0.56
CSNK1D-209ENST00000578904 IGKV1D-8A0A087WSZ0 117 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 NPIPB11E5RHQ5 1161 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 INMT-MINDY4F8WBC2 141 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 SDCBPO00560 298 aaPredicted RBP11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 PRAF2O60831 178 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 WNT2P09544 360 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 ZNF735P0CB33 412 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 FCGR2CP31995 323 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 BTCP35070 178 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 DMRTB1Q96MA1 342 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 MARVELD1Q9BSK0 173 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 C20orf85Q9H1P6 137 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 NUDT15Q9NV35 164 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 ZNF69Q9UC07 566 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 C14orf166Q9Y224 244 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 VPS13CQ709C8 3753 aa11.53□□□□□ -0.56
CSNK1D-209ENST00000578904 A0A096LNT2 108 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 TRBV6-7A0A0A0MS04 114 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 KBTBD11-OT1A0A1B0GTJ5 212 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 C12orf77C9JDV5 145 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 HBZP02008 142 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 RLN1P04808 185 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 SELLP14151 372 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 PGAM2P15259 253 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 TAS2R31P59538 309 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 IGSF11Q5DX21 431 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 Q6ZNX1 250 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 FAM185AQ8N0U4 392 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 TPRX1Q8N7U7 411 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 OR13A1Q8NGR1 328 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 EDARADDQ8WWZ3 215 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 ZNF714Q96N38 554 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 SSBP3Q9BWW4 388 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 GPN1Q9HCN4 374 aaPredicted RBP11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 CALYQ9NYX4 217 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 CTSZQ9UBR2 303 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 JPT1Q9UK76 154 aa11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 RBM7Q9Y580 266 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-209ENST00000578904 MALRD1Q5VYJ5 2156 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 TRAV6A0A075B6T7 132 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 A0A1B0GW55 424 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 SMAD7O15105 426 aaKnown RBP11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 PEX14O75381 377 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 SLC22A5O76082 557 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 IGHV2-5P01817 119 aa11.51□□□□□ -0.57
CSNK1D-209ENST00000578904 DUX4L2P0CJ85 424 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms