RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SESN1Q9Y6P5 492 aa9.27□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TRDCB7Z8K6 153 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 C12orf77C9JDV5 145 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 GABARAPH6UMI1 98 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SDCBPO00560 298 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 HSPA12AO43301 675 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 RBBP9O75884 186 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 DIRAS3O95661 229 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 HLA-DQB1P01920 261 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 HBZP02008 142 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CTXN2P0C2S0 81 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 IGHV1-8P0DP01 117 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 RCC1P18754 421 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SSTR5P35346 364 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ZNF45Q02386 682 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SSBP1Q04837 148 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 HMGN3Q15651 99 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 PYDC2Q56P42 97 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 GPR157Q5UAW9 335 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CCDC190Q86UF4 302 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 RTN4RL2Q86UN3 420 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 BEST4Q8NFU0 473 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 OR52M1Q8NGK5 317 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 NANPQ8TBE9 248 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 OCSTAMPQ9BR26 566 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ST6GALNAC5Q9BVH7 336 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SIRPDQ9H106 197 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 LINC00574Q9H8X3 128 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 UNKLQ9H9P5 680 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 GNG12Q9UBI6 72 aa9.26□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CSPG4Q6UVK1 2322 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TRAV39A0A0B4J263 110 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 MEX3AA1L020 520 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 NPIPB11E5RHQ5 1161 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 F2RL2O00254 374 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TOR1AO14656 332 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 FABP7O15540 132 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 LY6G6DO95868 133 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ZBTB25P24278 435 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 NFYBP25208 207 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 RCVRNP35243 200 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 INPP1P49441 399 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 DLX6P56179 175 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TAS2R46P59540 309 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 BPIFB3P59826 476 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 HTD2P86397 168 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 MADCAM1Q13477 382 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 LTC4SQ16873 150 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 Q3ZCU0 254 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CHRFAM7AQ494W8 412 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ACTBL2Q562R1 376 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 PRAMEF5Q5TYX0 476 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ZNF782Q6ZMW2 699 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TCF23Q7RTU1 214 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 HOGA1Q86XE5 327 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 RFESDQ8TAC1 157 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 GPX8Q8TED1 209 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 IL1F10Q8WWZ1 152 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 UPRTQ96BW1 309 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 MDFIQ99750 246 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TMPRSS13Q9BYE2 586 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TMEM133Q9H2Q1 129 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SIRT7Q9NRC8 400 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TAS2R8Q9NYW2 309 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ZNF230Q9UIE0 474 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ANXA10Q9UJ72 324 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 JPT1Q9UK76 154 aa9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ELF5Q9UKW6 265 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-210ENST00000578733 C15orf65H3BRN8 121 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SSX5O60225 188 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CSF1P09603 554 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CGB3P0DN86 165 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CGB7P0DN87 165 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 MMP9P14780 707 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 OMGP23515 440 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SRP14P37108 136 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 OR3A3P47888 321 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 PRRX1P54821 245 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 C17orf58Q2M2W7 97 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 Q8N7P7 452 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 GDPD1Q8N9F7 314 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 OR10J5Q8NHC4 309 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 ZNF596Q8TC21 504 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SMIM4Q8WVI0 70 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 EDARADDQ8WWZ3 215 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TNFRSF14Q92956 283 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 LHX4Q969G2 390 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CREB3L1Q96BA8 519 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 KIRREL1Q96J84 757 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 GINS4Q9BRT9 223 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 SUCNR1Q9BXA5 334 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 CLEC7AQ9BXN2 247 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 WDR12Q9GZL7 423 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 OR2S2Q9NQN1 319 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 NECAP2Q9NVZ3 263 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 AMMECR1Q9Y4X0 333 aaPredicted RBP9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 HIVEP2P31629 2446 aa9.24□□□□□ -0.93
CDK5RAP3-210ENST00000578733 A0A087X0M5 115 aa9.23□□□□□ -0.93
CDK5RAP3-210ENST00000578733 TRAV40A0A0B4J280 105 aa9.23□□□□□ -0.93
CDK5RAP3-210ENST00000578733 A0A1B0GX30 115 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms