RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 SH3BGRL3Q9H299 93 aa7.9□□□□□ -1.14
CDK5RAP3-208ENST00000578525 OBP2BQ9NPH6 170 aa7.9□□□□□ -1.14
CDK5RAP3-208ENST00000578525 KCNS2Q9ULS6 477 aa7.9□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FREM1Q5H8C1 2179 aa7.9□□□□□ -1.15
CDK5RAP3-208ENST00000578525 RTTNQ86VV8 2226 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 MED13Q9UHV7 2174 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 TRAV39A0A0B4J263 110 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 A0A0G2JRQ6 117 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 A0A1B0GW64 132 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 RNF212BA8MTL3 300 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 AHRRA9YTQ3 701 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 UMAD1C9J7I0 102 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 C9JQL5 133 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 MLNRO43193 412 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 HSPA12AO43301 675 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 WDR1O75083 606 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CEACAM4O75871 244 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 F12P00748 615 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PSG2P11465 335 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 EPHA1P21709 976 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 LMO1P25800 156 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ATP6V0CP27449 155 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CD200P41217 278 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ASCL1P50553 236 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 DYNLT3P51808 116 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PAX9P55771 341 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 RPL23AP62750 156 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 FLI1Q01543 452 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CLINT1Q14677 625 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 GUK1Q16774 197 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 SLC35E4Q6ICL7 350 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ODF3L1Q8IXM7 274 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 KDF1Q8NAX2 398 aaPredicted RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 OR2G3Q8NGZ4 309 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 OR51H1Q8NH63 302 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 RNASE11Q8TAA1 199 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 SNIP1Q8TAD8 396 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PRR7Q8TB68 274 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 FAM213BQ8TBF2 198 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 RAB40CQ96S21 281 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 BCL2L14Q9BZR8 327 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PARP12Q9H0J9 701 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PLSCR4Q9NRQ2 329 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 LIN7CQ9NUP9 197 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 KCNIP1Q9NZI2 227 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 TINAGQ9UJW2 476 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PROCRQ9UNN8 238 aa7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 RBM7Q9Y580 266 aaKnown RBP7.89□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ZDBF2Q9HCK1 2354 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PROB1E7EW31 1015 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ATP6V1G2-DDX39BF2Z307 99 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CHST1O43916 411 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 TIMM8AO60220 97 aaPredicted RBP7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 DFFBO76075 338 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 WISP2O76076 250 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 TMEM50AO95807 157 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 IGKV1-39P01597 117 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 IGLV1-44P01699 117 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 IGLV2-14P01704 120 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 IGKV1D-39P04432 117 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 HEXAP06865 529 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CECR9P0C854 216 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CEACAM1P13688 526 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CTRB1P17538 263 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 OMGP23515 440 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 EIF2S3P41091 472 aaKnown RBP7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 HFEQ30201 348 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ZNF718Q3SXZ3 478 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CTRB2Q6GPI1 263 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 TMEM88Q6PEY1 159 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ACP7Q6ZNF0 438 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 BHLHA15Q7RTS1 189 aaPredicted RBP7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CXorf67Q86X51 503 aaPredicted RBP7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 CBLN2Q8IUK8 224 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 C11orf53Q8IXP5 236 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 C1orf174Q8IYL3 243 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ZADH2Q8N4Q0 377 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 FAM169BQ8N8A8 192 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ZBTB34Q8NCN2 500 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 OR5C1Q8NGR4 320 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 TMEM171Q8WVE6 324 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 GNPNAT1Q96EK6 184 aaPredicted RBP7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 ATP5SQ99766 215 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PBDC1Q9BVG4 233 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 SCRT1Q9BWW7 348 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 TOLLIPQ9H0E2 274 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 OR14J1Q9UGF5 321 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PPP1R3CQ9UQK1 317 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 RNF115Q9Y4L5 304 aa7.88□□□□□ -1.15
CDK5RAP3-208ENST00000578525 PRUNE2Q8WUY3 3088 aa7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 IGHV2OR16-5A0A0B4J2B6 119 aa7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 MBD3L4A6NDZ8 208 aaPredicted RBP7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 BTBD17A6NE02 478 aa7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 MBD3L3A6NE82 208 aaPredicted RBP7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 MBD3L5A6NJ08 208 aaPredicted RBP7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 A6NLC8 198 aa7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 KIAA1324LA8MWY0 1029 aaPredicted RBP7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 C1QTNF9BB2RNN3 333 aa7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 TXNL1O43396 289 aa7.87□□□□□ -1.15
CDK5RAP3-208ENST00000578525 C1QL1O75973 258 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms