RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 MUC20Q8N307 709 aaPredicted RBP15.43■□□□□ 0.06
PRKCA-203ENST00000578063 ADAD2Q8NCV1 583 aaKnown RBP15.43■□□□□ 0.06
PRKCA-203ENST00000578063 RTBDNQ9BSG5 229 aaPredicted RBP15.43■□□□□ 0.06
PRKCA-203ENST00000578063 RAB9BQ9NP90 201 aa15.43■□□□□ 0.06
PRKCA-203ENST00000578063 SLC25A10Q9UBX3 287 aaPredicted RBP15.43■□□□□ 0.06
PRKCA-203ENST00000578063 SLC23A1Q9UHI7 598 aa15.43■□□□□ 0.06
PRKCA-203ENST00000578063 HSPA12AO43301 675 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 CCNKO75909 580 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 CLDN1O95832 211 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 IGHV2-70P01814 119 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 HLA-AP01891 365 aaKnown RBP15.42■□□□□ 0.06
PRKCA-203ENST00000578063 COX6B1P14854 86 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 AKR1C4P17516 323 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 ZBTB25P24278 435 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 CDKN1AP38936 164 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 DHRS2Q13268 280 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 LPCAT3Q6P1A2 487 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 LYG2Q86SG7 212 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 OR52B4Q8NGK2 314 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 TIMD4Q96H15 378 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 PLEKHF2Q9H8W4 249 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 OR2W1Q9Y3N9 320 aa15.42■□□□□ 0.06
PRKCA-203ENST00000578063 NDUFB3O43676 98 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 PI3P19957 117 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 DHODHQ02127 395 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 PPP1R1AQ13522 171 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 LRRC10Q5BKY1 277 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 OR1L1Q8NH94 360 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 RAB1CQ92928 201 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 ARL11Q969Q4 196 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 ZNF486Q96H40 463 aaPredicted RBP15.41■□□□□ 0.06
PRKCA-203ENST00000578063 CHODLQ9H9P2 273 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 OR1A1Q9P1Q5 309 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 DSCAMO60469 2012 aa15.41■□□□□ 0.06
PRKCA-203ENST00000578063 TRGV10A0A0A0MS01 117 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 C15orf65H3BRN8 121 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 HEXAP06865 529 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 NDUFB7P17568 137 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 SSTR5P35346 364 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 FCN2Q15485 313 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 UBALD1Q8TB05 177 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 TMEM230Q96A57 120 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 RSRP1Q9BUV0 290 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 LRRK2Q5S007 2527 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 OVOL3O00110 214 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 F12P00748 615 aaPredicted RBP15.4■□□□□ 0.06
PRKCA-203ENST00000578063 SULT1A3P0DMM9 295 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 SULT1A4P0DMN0 295 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 VAMP1P23763 118 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 EFNA4P52798 201 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 HTD2P86397 168 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 ABCA11PQ4W5N1 156 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 LYPD2Q6UXB3 125 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 NINJ1Q92982 152 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 DCTN5Q9BTE1 182 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 TOLLIPQ9H0E2 274 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 CTSZQ9UBR2 303 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 LPAR3Q9UBY5 353 aa15.4■□□□□ 0.06
PRKCA-203ENST00000578063 hADV38S2A0JD32 116 aa15.39■□□□□ 0.05
PRKCA-203ENST00000578063 C9orf170A2RU37 121 aa15.39■□□□□ 0.05
PRKCA-203ENST00000578063 LY6HO94772 140 aa15.39■□□□□ 0.05
PRKCA-203ENST00000578063 TMEM33P57088 247 aa15.39■□□□□ 0.05
PRKCA-203ENST00000578063 MEF2CQ06413 473 aaPredicted RBP15.39■□□□□ 0.05
PRKCA-203ENST00000578063 TMEM155Q4W5P6 130 aa15.39■□□□□ 0.05
PRKCA-203ENST00000578063 SP5Q6BEB4 398 aaPredicted RBP15.39■□□□□ 0.05
PRKCA-203ENST00000578063 C11orf88Q6PI97 169 aa15.39■□□□□ 0.05
PRKCA-203ENST00000578063 RDH8Q9NYR8 311 aa15.39■□□□□ 0.05
PRKCA-203ENST00000578063 COL12A1Q99715 3063 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 DUS4LO95620 317 aaKnown RBP15.38■□□□□ 0.05
PRKCA-203ENST00000578063 HNRNPCP07910 306 aaKnown RBP eCLIP15.38■□□□□ 0.055e-7■■■□□ 19.2
PRKCA-203ENST00000578063 CEACAM6P40199 344 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 PIGPP57054 158 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 FAM185AQ8N0U4 392 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 C12orf45Q8N5I9 185 aaPredicted RBP15.38■□□□□ 0.05
PRKCA-203ENST00000578063 CCDC71LQ8N9Z2 235 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 SECTM1Q8WVN6 248 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 IGFBPL1Q8WX77 278 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 CORO2AQ92828 525 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 SLC5A7Q9GZV3 580 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 SLC2A9Q9NRM0 540 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 CALYQ9NYX4 217 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 LINC00312Q9Y6C7 94 aa15.38■□□□□ 0.05
PRKCA-203ENST00000578063 SPTAN1Q13813 2472 aaKnown RBP15.38■□□□□ 0.05
PRKCA-203ENST00000578063 IGKV1D-13A0A0B4J2D9 117 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 F2RL2O00254 374 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 DVL1O14640 695 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 PPIHO43447 177 aaKnown RBP15.37■□□□□ 0.05
PRKCA-203ENST00000578063 SFT2D2O95562 160 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 CGB3P0DN86 165 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 CGB7P0DN87 165 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 IGKV1-13P0DP09 117 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 LUMP51884 338 aaPredicted RBP15.37■□□□□ 0.05
PRKCA-203ENST00000578063 CD300CQ08708 224 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 AVPI1Q5T686 147 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 SGPP2Q8IWX5 399 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 SPICQ8N5J4 248 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 OR11H7Q8NGC8 314 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 OR10V1Q8NGI7 309 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 MITD1Q8WV92 249 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 ST6GAL2Q96JF0 529 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms