RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 PSORS1C1Q9UIG5 152 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF107Q9UII5 783 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 MOB4Q9Y3A3 225 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 KMT2BQ9UMN6 2715 aaPredicted RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 A0A1W2PPE3 182 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 A6NNC1 897 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 E5RGE8 158 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 TMEM262E9PQX1 116 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 J3QR06 171 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SSSCA1O60232 199 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 FADS1O60427 444 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 DXOO77932 396 aaKnown RBP2.53□□□□□ -2
SMCHD1-203ENST00000577880 CELA3AP09093 270 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 PGA3P0DJD8 388 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SLC25A4P12235 298 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 BCL3P20749 454 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ZNF137PP52743 207 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SRSF1Q07955 248 aaKnown RBP eCLIP2.53□□□□□ -2
SMCHD1-203ENST00000577880 Q0VFX4 171 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 PJVKQ0ZLH3 352 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 FAM162BQ5T6X4 162 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SEZ6L2Q6UXD5 910 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 DLEU7Q6UYE1 221 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 HIST2H3AQ71DI3 136 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ARRDC1Q8N5I2 433 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 NHLRC2Q8NBF2 726 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 OR4Q3Q8NH05 313 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 LHFPL5Q8TAF8 219 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 BLNKQ8WV28 456 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 SLC25A33Q9BSK2 321 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 IL20Q9NYY1 176 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 DOK5Q9P104 306 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 UGT2A1Q9Y4X1 527 aa2.53□□□□□ -2
SMCHD1-203ENST00000577880 ECM29Q5VYK3 1845 aa2.53□□□□□ -2.01
SMCHD1-203ENST00000577880 MDC1Q14676 2089 aaKnown RBP2.53□□□□□ -2.01
SMCHD1-203ENST00000577880 SCN1AP35498 2009 aa2.53□□□□□ -2.01
SMCHD1-203ENST00000577880 WNK2Q9Y3S1 2297 aa2.53□□□□□ -2.01
SMCHD1-203ENST00000577880 TET1Q8NFU7 2136 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SCN10AQ9Y5Y9 1956 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ODAMA1E959 279 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PSMB11A5LHX3 300 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 MAGEB4O15481 346 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CFDP00746 253 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 BGLAPP02818 100 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 RFPL3SP0C7P2 107 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CDKN2AP42771 156 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 EMP1P54849 157 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 FOXL1Q12952 345 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SSX1Q16384 188 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 WDR38Q5JTN6 314 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF770Q6IQ21 691 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 LIAT1Q6ZQX7 453 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF826PQ6ZT77 177 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 RFPL4BQ6ZWI9 263 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 STHQ8IWL8 128 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 TMEM52Q8NDY8 209 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SFT2D1Q8WV19 159 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 YIPF6Q96EC8 236 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 C14orf79Q96F83 325 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 KRTAP17-1Q9BYP8 105 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SH2D2AQ9NP31 389 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 MRPL22Q9NWU5 206 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 TXNL4BQ9NX01 149 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CALYQ9NYX4 217 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 UFC1Q9Y3C8 167 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 WSB1Q9Y6I7 421 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 A0A1B0GUS0 222 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PSPNO60542 156 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 GREM1O60565 184 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 SPDEFO95238 335 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 MT-ND4LP03901 98 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ALPLP05186 524 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 FCER1GP30273 86 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 AMTP48728 403 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 P2RX3P56373 397 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 FGF12P61328 243 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PDZK1IP1Q13113 114 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 LGALSLQ3ZCW2 172 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ZNF672Q499Z4 452 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PLA2G2CQ5R387 149 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 BTNL8Q6UX41 500 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PDPNQ86YL7 162 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 FUNDC1Q8IVP5 155 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 TEX37Q96LM6 180 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 WFIKKN1Q96NZ8 548 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 RAB40CQ96S21 281 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CABLES2Q9BTV7 478 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 ANKRD60Q9BZ19 345 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 PKIBQ9C010 78 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CD300AQ9UGN4 299 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 NSG2Q9Y328 171 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 IGHV2OR16-5A0A0B4J2B6 119 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 IFITM5A6NNB3 132 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 F8W036 122 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 H0Y980 276 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 H7BYZ3 331 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 I3L521 148 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 CRXO43186 299 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 UMODP07911 640 aa2.52□□□□□ -2.01
SMCHD1-203ENST00000577880 H2AFB1P0C5Y9 115 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms