RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 TMEM241Q24JQ0 296 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 LRRC75BQ2VPJ9 315 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 TRMT5Q32P41 509 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF404Q494X3 552 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR10J3Q5JRS4 329 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SOHLH1Q5JUK2 328 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 C10orf91Q5T1B1 145 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM162BQ5T6X4 162 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SPATA31B1PQ5VZV4 182 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 GLYATQ6IB77 296 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM71F2Q6NXP2 309 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 WDR59Q6PJI9 974 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 Q6ZT83 130 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 STRADAQ7RTN6 431 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 CROCCP2Q86T23 111 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF429Q86V71 674 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 MUC15Q8N387 334 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM71E2Q8N5Q1 922 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 Q8N9W7 124 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR10AD1Q8NGE0 317 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR52I1Q8NGK6 324 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR10D4PQ8NGN7 298 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR1N2Q8NGR9 330 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR6N2Q8NGY6 317 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR4X1Q8NH49 305 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR1F12Q8NHA8 337 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SKA2Q8WVK7 121 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 MRPS31Q92665 395 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ART4Q93070 314 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 UCN3Q969E3 161 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 MALSU1Q96EH3 234 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 DCUN1D1Q96GG9 259 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 CENPNQ96H22 339 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 HPDLQ96IR7 371 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SLC35G5Q96KT7 338 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF488Q96MN9 340 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 KCTD7Q96MP8 289 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 GPR82Q96P67 336 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR2M4Q96R27 311 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 KCTD14Q9BQ13 255 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SULT4A1Q9BR01 284 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ACTR3CQ9C0K3 210 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 OR2J1Q9GZK6 312 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 RDH14Q9HBH5 336 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 BEX1Q9HBH7 125 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 PAK1IP1Q9NWT1 392 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 SLC25A37Q9NYZ2 338 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 HSPB8Q9UJY1 196 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ERG28Q9UKR5 140 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 V9GYS6 101 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 ATP10DQ9P241 1426 aa2.39□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM135AQ9P2D6 1515 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 IGHV1OR15-1A0A075B7D0 117 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A0A6YYD5 115 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 TRBV9A0A0B4J1U6 114 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SPAARA0A1B0GVQ0 90 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM269A0A1B0GVZ9 245 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 EXOC1LA0A1B0GW35 172 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 A0A1W2PRD5 423 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 ANKRD20A5PA0PJZ0 165 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 DCTN6O00399 190 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RBFOX2O43251 390 aaKnown RBP eCLIP2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF207O43670 478 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 EFNA2O43921 213 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SLC16A7O60669 478 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 CDS2O95674 445 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RAB36O95755 333 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 LALBAP00709 142 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 HLA-AP01891 365 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SERPINE1P05121 402 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 NMBP08949 121 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 TAC1P20366 129 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 PRTN3P24158 256 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 NUMBP49757 651 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF136P52737 540 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 AQP5P55064 265 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 PIGPP57054 158 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RAB25P57735 213 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 TAS2R30P59541 319 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RHOBP62745 196 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SELENOWP63302 87 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 PAFAH1B2P68402 229 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 BTN3A2P78410 334 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 NTHL1P78549 312 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 RUNX1Q01196 453 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 PRKCDQ05655 676 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 MOBPQ13875 183 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 VGLL4Q14135 290 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 TAL2Q16559 108 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 PRSS8Q16651 343 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 C4orf26Q17RF5 130 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 ZSWIM7Q19AV6 140 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 TBC1D28Q2M2D7 210 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 SSX6Q7RTT6 188 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 OR2W3Q7Z3T1 314 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 FAM19A1Q7Z5A9 133 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 CBLN2Q8IUK8 224 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 UMODL1-AS1Q8N2C9 162 aa2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 LRRC25Q8N386 305 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-202ENST00000577300 JAGN1Q8N5M9 183 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms