RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PARP16Q8N5Y8 322 aa10.33□□□□□ -0.76
COPS3-214ENST00000577246 OR10AC1Q8NH08 325 aa10.33□□□□□ -0.76
COPS3-214ENST00000577246 TNFAIP8L1Q8WVP5 186 aa10.33□□□□□ -0.76
COPS3-214ENST00000577246 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
COPS3-214ENST00000577246 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
COPS3-214ENST00000577246 ELOVL1Q9BW60 279 aa10.33□□□□□ -0.76
COPS3-214ENST00000577246 FAM192AQ9GZU8 254 aa10.33□□□□□ -0.76
COPS3-214ENST00000577246 CST11Q9H112 138 aa10.33□□□□□ -0.76
COPS3-214ENST00000577246 TRAV39A0A0B4J263 110 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 TCRBV3S1A0A5B6 114 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 G3V318 75 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 C15orf65H3BRN8 121 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 SPINT2O43291 252 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
COPS3-214ENST00000577246 RAB3AP20336 220 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 SLURP1P55000 103 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 ALKBH1Q13686 389 aaKnown RBP10.32□□□□□ -0.76
COPS3-214ENST00000577246 STEAP3Q658P3 488 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 ZDHHC13Q8IUH4 622 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 TCTEX1D1Q8N7M0 179 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 FLYWCH2Q96CP2 140 aaKnown RBP10.32□□□□□ -0.76
COPS3-214ENST00000577246 ZNF251Q9BRH9 671 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 TOLLIPQ9H0E2 274 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 C19orf73Q9NVV2 129 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 PAK1IP1Q9NWT1 392 aaPredicted RBP10.32□□□□□ -0.76
COPS3-214ENST00000577246 GNG12Q9UBI6 72 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 STUB1Q9UNE7 303 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 DHDHQ9UQ10 334 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 ST3GAL6Q9Y274 331 aa10.32□□□□□ -0.76
COPS3-214ENST00000577246 MAGEA13PA6NCF6 341 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 OR4C45A6NMZ5 311 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 LANCL1O43813 399 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 HTR3BO95264 441 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 GNGT1P63211 74 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 LSAMPQ13449 338 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 NHLRC3Q5JS37 347 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 LPCAT4Q643R3 524 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 PYHIN1Q6K0P9 492 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 SATL1Q86VE3 508 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 ANKRD13BQ86YJ7 626 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 MINDY2Q8NBR6 621 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 NEK7Q8TDX7 302 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 TSEN15Q8WW01 171 aaKnown RBP10.31□□□□□ -0.76
COPS3-214ENST00000577246 S100A13Q99584 98 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 RIBC2Q9H4K1 309 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 KIAA1456Q9P272 454 aa10.31□□□□□ -0.76
COPS3-214ENST00000577246 IGHV3-43A0A0B4J1X8 118 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 TMEM212A6NML5 194 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 J3QLW9 94 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 AIPO00170 330 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 GABRPO00591 440 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 NBR2O15453 112 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 IGHV3-43DP0DP04 118 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 ZNF19P17023 458 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 CD40LGP29965 261 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 RBM11P57052 281 aaKnown RBP10.3□□□□□ -0.76
COPS3-214ENST00000577246 ACTBP60709 375 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 MRPL28Q13084 256 aaKnown RBP10.3□□□□□ -0.76
COPS3-214ENST00000577246 MPV17LQ2QL34 196 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 C6orf183Q5T699 404 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 LIN54Q6MZP7 749 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 FAM53AQ6NSI3 398 aaPredicted RBP10.3□□□□□ -0.76
COPS3-214ENST00000577246 TRAT1Q6PIZ9 186 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 OR10K1Q8NGX5 313 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 OR52N1Q8NH53 320 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 PELI1Q96FA3 418 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 C4orf36Q96KX1 117 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 JAM3Q9BX67 310 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 GABARAPL1Q9H0R8 117 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 ALX4Q9H161 411 aaPredicted RBP10.3□□□□□ -0.76
COPS3-214ENST00000577246 METTL9Q9H1A3 318 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 IMPAD1Q9NX62 359 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 IL36GQ9NZH8 169 aa10.3□□□□□ -0.76
COPS3-214ENST00000577246 FOXA2Q9Y261 457 aaPredicted RBP10.3□□□□□ -0.76
COPS3-214ENST00000577246 STARD9Q9P2P6 4700 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 CSMD3Q7Z407 3707 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 SORL1Q92673 2214 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 IGHV4OR15-8A0A075B7B6 117 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 A0A087WW49 117 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 IGHV7-81A0A0B4J1V7 117 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 A0A1W2PN81 502 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 SNTNA6NMZ2 147 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 ZNF780AO75290 641 aaPredicted RBP10.29□□□□□ -0.76
COPS3-214ENST00000577246 HSPB1P04792 205 aaKnown RBP10.29□□□□□ -0.76
COPS3-214ENST00000577246 T-ENOLP0DO92 83 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 ARSBP15848 533 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 BLVRBP30043 206 aaPredicted RBP10.29□□□□□ -0.76
COPS3-214ENST00000577246 CHRNA7P36544 502 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 VHLP40337 213 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 TMEM267Q0VDI3 215 aaPredicted RBP10.29□□□□□ -0.76
COPS3-214ENST00000577246 ATP6AP1Q15904 470 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 C5orf64Q2M2E5 130 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 DNAL1Q4LDG9 190 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 ATAD3CQ5T2N8 411 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 ASCL4Q6XD76 172 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 ZNF497Q6ZNH5 498 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 Q8N1Y9 231 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 ACBD7Q8N6N7 88 aa10.29□□□□□ -0.76
COPS3-214ENST00000577246 ZNF439Q8NDP4 499 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms