RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 IGLV1-40P01703 118 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 CSTBP04080 98 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 IGHV3-43DP0DP04 118 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 FASP25445 335 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 POLR2IP36954 125 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 ZNF137PP52743 207 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 GALEQ14376 348 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 TMEM30BQ3MIR4 351 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 SLC25A48Q6ZT89 311 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 LINC00596Q86U02 117 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 OR10K1Q8NGX5 313 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 NEK7Q8TDX7 302 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 TRUB1Q8WWH5 349 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 TM2D3Q9BRN9 247 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 PARP11Q9NR21 331 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 GNG12Q9UBI6 72 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 MRPS28Q9Y2Q9 187 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 WSB1Q9Y6I7 421 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 DNAH1Q9P2D7 4330 aa9.03□□□□□ -0.96
CTDNEP1-212ENST00000576613 TRAV41A0A0B4J266 112 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 TRIM64CA6NLI5 447 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 SNTNA6NMZ2 147 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 G3V318 75 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 AIPO00170 330 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 SPINT2O43291 252 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 OR8U9P0C7N5 309 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 RAB9AP51151 201 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 RBM11P57052 281 aaKnown RBP9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 MRPL28Q13084 256 aaKnown RBP9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 KIAA0141Q14154 515 aaPredicted RBP9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 SRSF7Q16629 238 aaKnown RBP eCLIP9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 MPV17LQ2QL34 196 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 NHLRC3Q5JS37 347 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 MEDAGQ5VYS4 303 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 STX19Q8N4C7 294 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 OR52N1Q8NH53 320 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 OR5AK2Q8NH90 309 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 UBALD1Q8TB05 177 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 CCDC107Q8WV48 283 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 S100A13Q99584 98 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 PAK1IP1Q9NWT1 392 aaPredicted RBP9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 ERGIC3Q9Y282 383 aa9.02□□□□□ -0.97
CTDNEP1-212ENST00000576613 FAM90A10PA6NDY2 464 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 LINC01619G3V211 115 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 GEMIN2O14893 280 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 ATP6V0E1O15342 81 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 SLC31A2O15432 143 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 HLA-DRB1P01911 266 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 CD2P06729 351 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 FCGR1AP12314 374 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 PITPNAQ00169 270 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 LSAMPQ13449 338 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 ATAD3CQ5T2N8 411 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 STEAP3Q658P3 488 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 FAM53AQ6NSI3 398 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 ACSM6Q6P461 480 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 ASCL4Q6XD76 172 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 ZNF497Q6ZNH5 498 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 LYPD6Q86Y78 171 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 SYS1Q8N2H4 156 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 ZNF439Q8NDP4 499 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 DLX4Q92988 240 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 OR4C12Q96R67 309 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 ALG8Q9BVK2 526 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 METTL9Q9H1A3 318 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 EDA2RQ9HAV5 297 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 IL36GQ9NZH8 169 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 ZNF581Q9P0T4 197 aa9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 NKX1-2Q9UD57 310 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-212ENST00000576613 LANCL1O43813 399 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 ZNF780AO75290 641 aaPredicted RBP9□□□□□ -0.97
CTDNEP1-212ENST00000576613 CDRT1O95170 752 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 MT-ND4P03905 459 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 IGHV4-30-4P0DP06 118 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 SERPINA2P20848 420 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 VHLP40337 213 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 VEGFCP49767 419 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 SLURP1P55000 103 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 ACTBP60709 375 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 CT45A1Q5HYN5 189 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 SLC25A30Q5SVS4 291 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 C6orf183Q5T699 404 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 ZNF529Q6P280 563 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 TRAT1Q6PIZ9 186 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 ADAMTSL5Q6ZMM2 481 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 AMIGO2Q86SJ2 522 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 OR51A2Q8NGJ7 313 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 CT45A3Q8NHU0 189 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 ARPC1AQ92747 370 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 PDCD1LG2Q9BQ51 273 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 ZNF251Q9BRH9 671 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 JAM3Q9BX67 310 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 TOLLIPQ9H0E2 274 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 CST11Q9H112 138 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 SPACA1Q9HBV2 294 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 TAS2R4Q9NYW5 299 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 TRAPPC2LQ9UL33 140 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 OAZ3Q9UMX2 235 aa9□□□□□ -0.97
CTDNEP1-212ENST00000576613 ING4Q9UNL4 249 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms