RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NEIL1Q96FI4 390 aaPredicted RBP15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 CIB3Q96Q77 187 aaPredicted RBP15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 PAM16Q9Y3D7 125 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 SLC22A20A6NK97 555 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 C11orf94C9JXX5 98 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 C3orf80F5H4A9 247 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 ACAA1P09110 424 aaPredicted RBP15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 MDH2P40926 338 aaKnown RBP15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 OR1C1Q15619 314 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 HIKESHIQ53FT3 197 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 ZNF385CQ66K41 422 aaPredicted RBP15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 SLC25A47Q6Q0C1 308 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 FGF11Q92914 225 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 TP53RKQ96S44 253 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 IL17BQ9UHF5 180 aa15.51■□□□□ 0.07
ATPAF1-214ENST00000576409 RBM11P57052 281 aaKnown RBP15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 SLC25A45Q8N413 288 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 VAMP8Q9BV40 100 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 GGACTQ9BVM4 153 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 VAX2Q9UIW0 290 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 HSBP1O75506 76 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 CST2P09228 141 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 PAX6P26367 422 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 MNX1P50219 401 aaPredicted RBP15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 CADM4Q8NFZ8 388 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 A0A1B0GTI1 187 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 OR5D13Q8NGL4 314 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 Q9N2K0 584 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 SLC35D1Q9NTN3 355 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 TREM2Q9NZC2 230 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 PTBP3O95758 552 aaKnown RBP15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 DANCRP0C864 163 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 TNFSF4P23510 183 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 SRD5A2P31213 254 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 GNG10P50151 68 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 CYB5R2Q6BCY4 276 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 TMEM211Q6ICI0 200 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 TMPRSS7Q7RTY8 843 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 FLVCR1-AS1Q8TAF5 88 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 PCGF1Q9BSM1 259 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 ZNF391Q9UJN7 358 aa15.5■□□□□ 0.07
ATPAF1-214ENST00000576409 CLN5O75503 358 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 SUMO1P63165 101 aaKnown RBP15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 GPR35Q9HC97 309 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 CLEC1BQ9P126 229 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 NAT8Q9UHE5 227 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 IGKV1D-8A0A087WSZ0 117 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 TMEM30CPA0ZSE6 113 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 SYNGR1O43759 233 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 IL2RAP01589 272 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 DPPA3Q6W0C5 159 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 OR2Z1Q8NG97 314 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 OR2W1Q9Y3N9 320 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 RFNGQ9Y644 331 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 IGHV5-10-1A0A0J9YXX1 117 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 A0A1B0GV90 55 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 SPRY3O43610 288 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 EPHA8P29322 1005 aaPredicted RBP15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 AMTP48728 403 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 GAMTQ14353 236 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 FAM27BQ5VT28 67 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 FER1L6-AS2Q96M78 137 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 DYNLRB1Q9NP97 96 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 WBP1LQ9NX94 342 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 ARL2-SNX15V9GYD0 113 aa15.49■□□□□ 0.07
ATPAF1-214ENST00000576409 ZIC3O60481 467 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 GYPAP02724 150 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 TRGC1P0CF51 173 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 LIFP15018 202 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 ZNF25P17030 456 aaPredicted RBP15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 F2RP25116 425 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 IGLV3-21P80748 117 aaPredicted RBP15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 PNRC1Q12796 327 aaPredicted RBP15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 CAMPP49913 170 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 UBE2G1P62253 170 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 VAMP3Q15836 100 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 C16orf82Q7Z2V1 217 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 SSUH2Q9Y2M2 353 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 CARHSP1Q9Y2V2 147 aaKnown RBP15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 EFEMP2O95967 443 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 BCL2P10415 239 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 PRF1P14222 555 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 HLA-GP17693 338 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 EIF3IQ13347 325 aaKnown RBP15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 EIF4E3Q8N5X7 224 aaKnown RBP15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 TMEM178AQ8NBL3 297 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 TMEM230Q96A57 120 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 TMEM222Q9H0R3 208 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 TMEM9BQ9NQ34 198 aa15.48■□□□□ 0.07
ATPAF1-214ENST00000576409 PMELP40967 661 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 THBS3P49746 956 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 LYG1Q8N1E2 194 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 OIT3Q8WWZ8 545 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 A0A0U1RQV5 110 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 MAGEA5P43359 124 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 KHDC3LQ587J8 217 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 AESQ08117 197 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 MRGPRGQ86SM5 289 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 DTD1Q8TEA8 209 aa15.47■□□□□ 0.07
ATPAF1-214ENST00000576409 Q96M66 194 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms