RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 NUBP2Q9Y5Y2 271 aa3.84□□□□□ -1.79
TSR1-203ENST00000575049 ZNF236Q9UL36 1845 aa3.84□□□□□ -1.8
TSR1-203ENST00000575049 ZFC3H1O60293 1989 aaKnown RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 TRAV19A0A0A6YYK7 116 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 FAM240AA0A1B0GVK7 77 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 TINCRA0A1B0GVN0 87 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 CIB4A0PJX0 185 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 IFITM10A6NMD0 228 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 DHRS7CA6NNS2 312 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 A8MXK9 166 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 H7C1H1 209 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 M0R129 80 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 FAAHO00519 579 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 MPC2O95563 127 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 CPSF4O95639 269 aaKnown RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 SOD1P00441 154 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 C1QCP02747 245 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 OR4E1P0C645 316 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 PIRTP0C851 137 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 ZNF286BP0CG31 522 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 SULT1A3P0DMM9 295 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 SULT1A4P0DMN0 295 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 CD37P11049 281 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 SLC2A1P11166 492 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 RAB3AP20336 220 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 F8A1P23610 371 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 HTR1DP28221 377 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 BTCP35070 178 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 GLP1RP43220 463 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 INPP1P49441 399 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 DLX6P56179 175 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 WNT4P56705 351 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 SMIM11AP58511 58 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 KRTAP10-9P60411 292 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 SNRPD1P62314 119 aaKnown RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 RPS25P62851 125 aaKnown RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 FLI1Q01543 452 aaPredicted RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 ZNF763Q0D2J5 394 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 GUK1Q16774 197 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 ZNF630Q2M218 657 aaPredicted RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 LGALSLQ3ZCW2 172 aaPredicted RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 ZNF658BQ4V348 819 aaPredicted RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 WDR74Q6RFH5 385 aaPredicted RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 MRPL55Q7Z7F7 128 aaKnown RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 NR2C2APQ86WQ0 139 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 SKA3Q8IX90 412 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 CLECL1Q8IZS7 167 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 EIF4E3Q8N5X7 224 aaKnown RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 ZNF485Q8NCK3 441 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 OR52P1PQ8NH57 321 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 DTD1Q8TEA8 209 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 P2RX4Q99571 388 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 KIR2DL4Q99706 377 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 TSSK6Q9BXA6 273 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 C11orf49Q9H6J7 331 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 NMNAT1Q9HAN9 279 aaPredicted RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 TMEM27Q9HBJ8 222 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 SPANXB1Q9NS25 103 aaPredicted RBP3.83□□□□□ -1.8
TSR1-203ENST00000575049 TREM2Q9NZC2 230 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 COPZ2Q9P299 210 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 XCL2Q9UBD3 114 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 SCP2D1Q9UJQ7 156 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 MMACHCQ9Y4U1 282 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 NOTCH4Q99466 2003 aa3.83□□□□□ -1.8
TSR1-203ENST00000575049 DICER1Q9UPY3 1922 aaKnown RBP3.82□□□□□ -1.8
TSR1-203ENST00000575049 MGAMO43451 1857 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 SBF1O95248 1867 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 K7N7A8 449 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 CTNSO60931 367 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 SLC25A14O95258 325 aaPredicted RBP3.82□□□□□ -1.8
TSR1-203ENST00000575049 RLN2P04090 185 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 HLA-DPB1P04440 258 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 HMGN1P05114 100 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 ISG15P05161 165 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 C8GP07360 202 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 CTSLP07711 333 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 MPC1LP0DKB6 136 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 SMIM10L2AP0DMW4 78 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 SMIM10L2BP0DMW5 78 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 AQP1P29972 269 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 GRPRP30550 384 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 PFN2P35080 140 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 ARPP19P56211 112 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 RAB38P57729 211 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 LINC01547P58512 204 aaPredicted RBP3.82□□□□□ -1.8
TSR1-203ENST00000575049 RANP62826 216 aaKnown RBP3.82□□□□□ -1.8
TSR1-203ENST00000575049 CDK6Q00534 326 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 FABP5Q01469 135 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 CEACAM21Q3KPI0 293 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 ZNF718Q3SXZ3 478 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 TMEM176BQ3YBM2 270 aaPredicted RBP3.82□□□□□ -1.8
TSR1-203ENST00000575049 NHLRC3Q5JS37 347 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 ZNF620Q6ZNG0 422 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 HSD17B13Q7Z5P4 300 aaPredicted RBP3.82□□□□□ -1.8
TSR1-203ENST00000575049 LRRC28Q86X40 367 aaPredicted RBP3.82□□□□□ -1.8
TSR1-203ENST00000575049 CDC20BQ86Y33 519 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 CALHM1Q8IU99 346 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 SLC22A18ASQ8N1D0 253 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 GAPTQ8N292 157 aa3.82□□□□□ -1.8
TSR1-203ENST00000575049 LINC00471Q8N535 108 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms