RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 H0YHG0 523 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 M0QZK8 103 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 HSD17B6O14756 317 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 TMEM11P17152 192 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 REG1BP48304 166 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 TCTEX1D4Q5JR98 221 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 SIGIRRQ6IA17 410 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 C10orf99Q6UWK7 81 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 MOB3BQ86TA1 216 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 OR4F17Q8NGA8 305 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 Q96M66 194 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 OR4F4Q96R69 305 aa20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 PRKDCP78527 4128 aaKnown RBP20.71■□□□□ 0.91
NPLOC4-215ENST00000574095 UBE2QL1A1L167 161 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 FAM90A10PA6NDY2 464 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 FAM90A7PA6NKC0 464 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 FAM90A23PA8MXZ1 464 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 CCRL2O00421 344 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 IGKV1D-33P01593 117 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 IGKV1-33P01594 117 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 GAPDHP04406 335 aaKnown RBP20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 FUT3P21217 361 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 SLC35A2P78381 396 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 ZNF816Q0VGE8 651 aaPredicted RBP20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 GPR50Q13585 617 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 LRRTM1Q86UE6 522 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 PRR18Q8N4B5 295 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 LINC00311Q8N616 119 aa20.7■□□□□ 0.9
NPLOC4-215ENST00000574095 IGHV1-3A0A0C4DH29 117 aa20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 RCC1P18754 421 aaPredicted RBP20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 IRF3Q14653 427 aa20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 BEAN1Q3B7T3 259 aa20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 RBM48Q5RL73 367 aaKnown RBP20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 SAMD5Q5TGI4 173 aa20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 CEACAM19Q7Z692 300 aa20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 GAPTQ8N292 157 aa20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 GHRLQ9UBU3 117 aa20.69■□□□□ 0.9
NPLOC4-215ENST00000574095 TGP01266 2768 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 IGHV3-72A0A0B4J1Y9 119 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 TCRBV4S1A1TA0A5B7 111 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 SLC31A2O15432 143 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 SPINT2O43291 252 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 SC5DO75845 299 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 MPIG6BO95866 241 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 C6orf183Q5T699 404 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 OR10K2Q6IF99 312 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 OR1L1Q8NH94 360 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 CST11Q9H112 138 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 TPRKBQ9Y3C4 175 aa20.68■□□□□ 0.9
NPLOC4-215ENST00000574095 HBZP02008 142 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 GLAP06280 429 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 MYF6P23409 242 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 LIPKQ5VXJ0 399 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 GLT8D1Q68CQ7 371 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 C5orf24Q7Z6I8 188 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 C5orf56Q8N8D9 126 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 C8orf31Q8N9H6 132 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 OR10V1Q8NGI7 309 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 GNG12Q9UBI6 72 aa20.67■□□□□ 0.9
NPLOC4-215ENST00000574095 PDCD6O75340 191 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 CA11O75493 328 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 SRMP19623 302 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 ZNF134P52741 427 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 HSD17B12Q53GQ0 312 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 OXLD1Q5BKU9 147 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 NKAPLQ5M9Q1 402 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 ZNF439Q8NDP4 499 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 OR4X2Q8NGF9 303 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 PHYHIPQ92561 330 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 UFD1Q92890 307 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 TMEM203Q969S6 136 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 ST6GALNAC6Q969X2 333 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 DUSP21Q9H596 190 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 TAF9BQ9HBM6 251 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 RAB9BQ9NP90 201 aa20.66■□□□□ 0.9
NPLOC4-215ENST00000574095 UBBP0CG47 229 aa20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 VSIG8P0DPA2 414 aa20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 IL3RAP26951 378 aa20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 EBI3Q14213 229 aa20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 Q3ZCU0 254 aa20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 C1orf100Q5SVJ3 147 aa20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 RTN4IP1Q8WWV3 396 aaPredicted RBP20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 EAF1Q96JC9 268 aaPredicted RBP20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 KCNK15Q9H427 330 aa20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 TSSC4Q9Y5U2 329 aaPredicted RBP20.65■□□□□ 0.9
NPLOC4-215ENST00000574095 FGF16O43320 207 aa20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 RGS10O43665 173 aa20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 HSMCR30P0CW71 290 aa20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 CT45A1Q5HYN5 189 aa20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 TRAT1Q6PIZ9 186 aa20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 SLC25A48Q6ZT89 311 aaKnown RBP20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 CT45A3Q8NHU0 189 aa20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 MRPL30Q8TCC3 161 aaKnown RBP20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 ANKRD60Q9BZ19 345 aa20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 CCDC90BQ9GZT6 254 aa20.64■□□□□ 0.89
NPLOC4-215ENST00000574095 UCHL1P09936 223 aa20.63■□□□□ 0.89
NPLOC4-215ENST00000574095 PF4V1P10720 104 aa20.63■□□□□ 0.89
NPLOC4-215ENST00000574095 KHDC1LQ5JSQ8 128 aa20.63■□□□□ 0.89
NPLOC4-215ENST00000574095 KPRPQ5T749 579 aaPredicted RBP20.63■□□□□ 0.89
NPLOC4-215ENST00000574095 ZNF329Q86UD4 541 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms