RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 TGP01266 2768 aa7.96□□□□□ -1.13
RPA1-206ENST00000573994 FAM90A10PA6NDY2 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A18PA6NE21 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A16PA6NEW6 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A20PA6NIJ5 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A7PA6NKC0 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A12PA8MX19 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A5PA8MXJ8 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A23PA8MXZ1 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 C15orf65H3BRN8 121 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 SDCBPO00560 298 aaPredicted RBP7.96□□□□□ -1.14
RPA1-206ENST00000573994 HSD17B6O14756 317 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 CA11O75493 328 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 IGLV1-40P01703 118 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 GLAP06280 429 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 SNRNP70P08621 437 aaKnown RBP7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A15PP0C7V4 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A13PP0C7W8 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A14PP0C7W9 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM90A24PP0C7X0 464 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 FAM106CPP0CH98 169 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 MGMTP16455 207 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 EMX1Q04741 257 aaPredicted RBP7.96□□□□□ -1.14
RPA1-206ENST00000573994 MADCAM1Q13477 382 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 GPR50Q13585 617 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 MED22Q15528 200 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 TMEM30BQ3MIR4 351 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 ACSM3Q53FZ2 586 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 RBM48Q5RL73 367 aaKnown RBP7.96□□□□□ -1.14
RPA1-206ENST00000573994 RAB12Q6IQ22 244 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 ZNF497Q6ZNH5 498 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 LYPD6Q86Y78 171 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 THNSL2Q86YJ6 484 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 PRR18Q8N4B5 295 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 OR10V1Q8NGI7 309 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 OR52M1Q8NGK5 317 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 OR4K15Q8NH41 348 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 WIPF2Q8TF74 440 aaPredicted RBP7.96□□□□□ -1.14
RPA1-206ENST00000573994 RBM14Q96PK6 669 aaKnown RBP7.96□□□□□ -1.14
RPA1-206ENST00000573994 UQCC2Q9BRT2 126 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 VCX3BQ9H321 246 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 ETAA1Q9NY74 926 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 MOB4Q9Y3A3 225 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 TET2Q6N021 2002 aaPredicted RBP7.96□□□□□ -1.14
RPA1-206ENST00000573994 KIAA2026Q5HYC2 2103 aa7.96□□□□□ -1.14
RPA1-206ENST00000573994 IGHV3-72A0A0B4J1Y9 119 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 UBE2QL1A1L167 161 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 C12orf77C9JDV5 145 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 MCRIP1C9JLW8 97 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 G3V4G9 280 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 SLC31A2O15432 143 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 ORC5O43913 435 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 MPIG6BO95866 241 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 MT-ND4P03905 459 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 OPN1MWP04001 364 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 AMY1AP04745 511 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 AMY2AP04746 511 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 OPN1MW2P0DN77 364 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 OPN1MW3P0DN78 364 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 TMEM11P17152 192 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 RANBP1P43487 201 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 RAB7AP51149 207 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 GP2P55259 537 aaKnown RBP7.95□□□□□ -1.14
RPA1-206ENST00000573994 HES1Q14469 280 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 HNF4GQ14541 408 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 Q3ZCU0 254 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 SYT6Q5T7P8 510 aaPredicted RBP7.95□□□□□ -1.14
RPA1-206ENST00000573994 LIPKQ5VXJ0 399 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 OR10K2Q6IF99 312 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 C10orf99Q6UWK7 81 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 C8orf31Q8N9H6 132 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 OR1L1Q8NH94 360 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 UFD1Q92890 307 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 R3HDM4Q96D70 268 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 RBMXL1Q96E39 390 aaKnown RBP7.95□□□□□ -1.14
RPA1-206ENST00000573994 Q96M66 194 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 GFOD1Q9NXC2 390 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 TRAPPC2LQ9UL33 140 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 TPRKBQ9Y3C4 175 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 PEX16Q9Y5Y5 336 aa7.95□□□□□ -1.14
RPA1-206ENST00000573994 CCRL2O00421 344 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 IGKV1D-33P01593 117 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 IGKV1-33P01594 117 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 UBBP0CG47 229 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 HSMCR30P0CW71 290 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 LOXL3P58215 753 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 RPS25P62851 125 aaKnown RBP7.94□□□□□ -1.14
RPA1-206ENST00000573994 SLC35A2P78381 396 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 IRF3Q14653 427 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 GNMTQ14749 295 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 SPHARQ15513 63 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 HSD17B12Q53GQ0 312 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 KHDC1LQ5JSQ8 128 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 SIGIRRQ6IA17 410 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 TRAT1Q6PIZ9 186 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 IZUMO2Q6UXV1 221 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 CEACAM19Q7Z692 300 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 C5orf24Q7Z6I8 188 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 MOB3BQ86TA1 216 aa7.94□□□□□ -1.14
RPA1-206ENST00000573994 ZNF554Q86TJ5 538 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms