RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 ZNF488Q96MN9 340 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 RAB40CQ96S21 281 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 RPRMQ9NS64 109 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 ZFP92A6NM28 416 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 NTN3O00634 580 aaPredicted RBP13.34□□□□□ -0.27
NUP88-207ENST00000573584 CNOT4O95628 575 aaKnown RBP13.34□□□□□ -0.27
NUP88-207ENST00000573584 SPINK2P20155 84 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 TRA2AQ13595 282 aaKnown RBP eCLIP13.34□□□□□ -0.27
NUP88-207ENST00000573584 OR2B11Q5JQS5 317 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 ZNF324BQ6AW86 544 aaPredicted RBP13.34□□□□□ -0.27
NUP88-207ENST00000573584 H1FOOQ8IZA3 346 aaPredicted RBP13.34□□□□□ -0.27
NUP88-207ENST00000573584 LINC00469Q8N7U9 141 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 OR10G4Q8NGN3 311 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 SCGB1C1Q8TD33 95 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 APOBEC3DQ96AK3 386 aaPredicted RBP13.34□□□□□ -0.27
NUP88-207ENST00000573584 RSG1Q9BU20 258 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 SIT1Q9Y3P8 196 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 DMDP11532 3685 aa13.34□□□□□ -0.27
NUP88-207ENST00000573584 KIAA1324LA8MWY0 1029 aaPredicted RBP13.33□□□□□ -0.27
NUP88-207ENST00000573584 B4DEV8 164 aa13.33□□□□□ -0.27
NUP88-207ENST00000573584 NGFP01138 241 aa13.33□□□□□ -0.27
NUP88-207ENST00000573584 CYB561P49447 251 aa13.33□□□□□ -0.27
NUP88-207ENST00000573584 RNPS1Q15287 305 aaKnown RBP13.33□□□□□ -0.27
NUP88-207ENST00000573584 Q6ZRM9 215 aa13.33□□□□□ -0.27
NUP88-207ENST00000573584 OR5A2Q8NGI9 324 aa13.33□□□□□ -0.27
NUP88-207ENST00000573584 PRDM6Q9NQX0 595 aa13.33□□□□□ -0.27
NUP88-207ENST00000573584 PMS2CLQ68D20 193 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 LCN15Q6UWW0 184 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 IL1F10Q8WWZ1 152 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 GTF3AQ92664 365 aaKnown RBP13.33□□□□□ -0.28
NUP88-207ENST00000573584 MRPS18CQ9Y3D5 142 aaKnown RBP13.33□□□□□ -0.28
NUP88-207ENST00000573584 SEC14L6B5MCN3 397 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 JMJD7P0C870 316 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 SLC25A6P12236 298 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 FOXG1P55316 489 aaPredicted RBP13.33□□□□□ -0.28
NUP88-207ENST00000573584 FAM90A2PQ658T7 463 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 PLK3Q9H4B4 646 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 ZNF665Q9H7R5 613 aa13.33□□□□□ -0.28
NUP88-207ENST00000573584 ZNF503-AS2A6NEH8 195 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 ZNF787Q6DD87 383 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 TUSC5Q8IXB3 177 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 VSIRQ9H7M9 311 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 CISD1Q9NZ45 108 aaKnown RBP13.32□□□□□ -0.28
NUP88-207ENST00000573584 CACNG5Q9UF02 275 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 TRAV24A0A0B4J272 114 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 PIGBOS1A0A0B4J2F0 54 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 C3orf80F5H4A9 247 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 PPP1R2P9O14990 202 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 IGHEP01854 428 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 BCL2P10415 239 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 NKX6-1P78426 367 aaPredicted RBP13.32□□□□□ -0.28
NUP88-207ENST00000573584 OR10D4PQ8NGN7 298 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 OR13D1Q8NGV5 346 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 FAM210BQ96KR6 192 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 LINC00470Q9BZP3 86 aa13.32□□□□□ -0.28
NUP88-207ENST00000573584 IGKV3D-15A0A087WSY6 115 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 CD300LBA8K4G0 201 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 SYNGR2O43760 224 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 METTL15P1P0C7V9 234 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 IAPPP10997 89 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 FGF8P55075 233 aaPredicted RBP13.31□□□□□ -0.28
NUP88-207ENST00000573584 PDZD11Q5EBL8 140 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 C9orf152Q5JTZ5 239 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 GFI1BQ5VTD9 330 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 SPINK14Q6IE38 97 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 TCEAL6Q6IPX3 200 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 C17orf78Q8N4C9 275 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 PFDN5Q99471 154 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 ZNF407Q9C0G0 2248 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 ZNF729A6NN14 1252 aaPredicted RBP13.31□□□□□ -0.28
NUP88-207ENST00000573584 CDPF1Q6NVV7 123 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 LINC00596Q86U02 117 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 ZNF383Q8NA42 475 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 OR5P3Q8WZ94 311 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 GPR61Q9BZJ8 451 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 PSENENQ9NZ42 101 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 TREM2Q9NZC2 230 aa13.31□□□□□ -0.28
NUP88-207ENST00000573584 TRBV6-6A0A0A6YYG2 114 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 SOD3P08294 240 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 ARL16Q0P5N6 197 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 PNRC1Q12796 327 aaPredicted RBP13.3□□□□□ -0.28
NUP88-207ENST00000573584 ZNF726P1Q15940 193 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 OR2T2Q6IF00 324 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 C1orf87Q8N0U7 546 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 OR10V1Q8NGI7 309 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 OR1A1Q9P1Q5 309 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 CLDN34H7C241 214 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 GATCO43716 136 aaKnown RBP13.3□□□□□ -0.28
NUP88-207ENST00000573584 IGKV1-39P01597 117 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 IGKV1D-39P04432 117 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 COX5BP10606 129 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 FAM58AQ8N1B3 248 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 FREM1Q5H8C1 2179 aa13.3□□□□□ -0.28
NUP88-207ENST00000573584 ANKRD30BLA7E2S9 258 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 YKT6O15498 198 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 LILRA1O75019 489 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 TRGC1P0CF51 173 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 ZNF573Q86YE8 665 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 PRR18Q8N4B5 295 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1224.2 ms