RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SPACA1Q9HBV2 294 aa5.64□□□□□ -1.51
SMG6-209ENST00000571442 RAB22AQ9UL26 194 aa5.64□□□□□ -1.51
SMG6-209ENST00000571442 TRAPPC2LQ9UL33 140 aa5.64□□□□□ -1.51
SMG6-209ENST00000571442 PSG11Q9UQ72 335 aa5.64□□□□□ -1.51
SMG6-209ENST00000571442 HILPDAQ9Y5L2 63 aa5.64□□□□□ -1.51
SMG6-209ENST00000571442 IGKV1D-8A0A087WSZ0 117 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 IGKV1-6A0A0C4DH72 117 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 hCG_1809904A0A1W2PP81 198 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 A0A1W2PPE2 198 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 A0A1W2PR64 198 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 A0A1W2PRV1 198 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 H3BUX3 64 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 CLDN34H7C241 214 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 J3QR06 171 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 ORC5O43913 435 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 CHST1O43916 411 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 GABARAPO95166 117 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 HBZP02008 142 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 GLAP06280 429 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 FBP1P09467 338 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 PTHLHP12272 177 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 RAB6AP20340 208 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 CD24P25063 80 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 SERPINB10P48595 397 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 PSMD7P51665 324 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 SCGB2A2Q13296 93 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 RBM39Q14498 530 aaKnown RBP5.63□□□□□ -1.51
SMG6-209ENST00000571442 HMGN3Q15651 99 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 LY6EQ16553 131 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 HLA-DRB5Q30154 266 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 GPR107Q5VW38 600 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 GDPGP1Q6ZNW5 385 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 Q6ZTK2 550 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 ANKRD13BQ86YJ7 626 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 PRR18Q8N4B5 295 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 DTX3Q8N9I9 347 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 ZNF565Q8N9K5 539 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 OR10V1Q8NGI7 309 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 OR10R2Q8NGX6 335 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 NDNFQ8TB73 568 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 FAM216AQ8WUB2 273 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 MAFIPQ8WZ33 124 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 SSX3Q99909 188 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 URM1Q9BTM9 101 aaKnown RBP5.63□□□□□ -1.51
SMG6-209ENST00000571442 TAF9BQ9HBM6 251 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 VCX3AQ9NNX9 186 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 PLEKHJ1Q9NW61 149 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 GFOD1Q9NXC2 390 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 HSF4Q9ULV5 492 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 FAM96BQ9Y3D0 163 aa5.63□□□□□ -1.51
SMG6-209ENST00000571442 TBL2Q9Y4P3 447 aaKnown RBP5.63□□□□□ -1.51
SMG6-209ENST00000571442 A0A075B6Q4 140 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 TRBV6-6A0A0A6YYG2 114 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 TMEM89A2RUT3 159 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 FAM181BA6NEQ2 426 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 BUB1B-PAK6H3BSN5 160 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 TRIM77I1YAP6 450 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 SDCBPO00560 298 aaPredicted RBP5.62□□□□□ -1.51
SMG6-209ENST00000571442 GPR137BO60478 399 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 CA11O75493 328 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 SCTP09683 121 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 CD3GP09693 182 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 HIST1H1DP16402 221 aaKnown RBP5.62□□□□□ -1.51
SMG6-209ENST00000571442 GZMHP20718 246 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 LGALS4P56470 323 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 SPCS2Q15005 226 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 HERPUD1Q15011 391 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 FAM189A2Q15884 450 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 LRRC75BQ2VPJ9 315 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 TIMM50Q3ZCQ8 353 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 ZNF260Q3ZCT1 412 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 CT45A1Q5HYN5 189 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 TPTE2P1Q5T6R2 138 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 C16orf87Q6PH81 154 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 RBMS3Q6XE24 437 aaKnown RBP5.62□□□□□ -1.51
SMG6-209ENST00000571442 Q6ZS46 218 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 IZUMO1Q8IYV9 350 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 OR56B1Q8NGI3 324 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 OR9G1Q8NH87 305 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 CT45A3Q8NHU0 189 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 SETD6Q8TBK2 473 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 ZNF596Q8TC21 504 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 SSMEM1Q8WWF3 244 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 PTX4Q96A99 478 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 RAB3CQ96E17 227 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 JMJD8Q96S16 334 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 ATG5Q9H1Y0 275 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 MMP28Q9H239 520 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 Q9N2K0 584 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 RHBDL2Q9NX52 303 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 C1RLQ9NZP8 487 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 OR1A1Q9P1Q5 309 aa5.62□□□□□ -1.51
SMG6-209ENST00000571442 ZNF230Q9UIE0 474 aaPredicted RBP5.62□□□□□ -1.51
SMG6-209ENST00000571442 A0A1W2PPI3 338 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 A6NDX4 124 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 TMEM235A6NFC5 223 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 VGLL3A8MV65 326 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 SSX5O60225 188 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 FCGR3AP08637 254 aa5.61□□□□□ -1.51
SMG6-209ENST00000571442 HKR1P10072 659 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms